RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 SUCLA2Q9P2R7 463 aaPredicted RBP19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 CNOT8Q9UFF9 292 aaKnown RBP19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 KRT16P08779 473 aa19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 FMO5P49326 533 aa19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 YARSP54577 528 aaKnown RBP19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 MRPS9P82933 396 aaKnown RBP19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 BFSP1Q12934 665 aa19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 LRRC36Q1X8D7 754 aa19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 TTC16Q8NEE8 873 aa19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 TEPSINQ96N21 525 aa19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 ANKEF1Q9NU02 776 aa19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 MAP3K20Q9NYL2 800 aaKnown RBP19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 RBAKQ9NYW8 714 aaPredicted RBP19.94■□□□□ 0.78
PPFIA1-202ENST00000389547 EP400Q96L91 3159 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 C10orf71Q711Q0 1435 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 PDE4DIPQ5VU43 2346 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 A0A1W2PQJ5 194 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 KLHL33A6NCF5 533 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 DCDC2CA8MYV0 355 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 SHBGP04278 402 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 SERPINB3P29508 390 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 GJC2Q5T442 439 aaPredicted RBP19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 NME8Q8N427 588 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 HSD17B14Q9BPX1 270 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 TMEM165Q9HC07 324 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 KCND2Q9NZV8 630 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 DPPA5A6NC42 116 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 OATP04181 439 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 GTF2A2P52657 109 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 LIN9Q5TKA1 542 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 CBWD2Q8IUF1 395 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 MAP7D3Q8IWC1 876 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 FAM161BQ96MY7 647 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 DNAI2Q9GZS0 605 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 PABPC3Q9H361 631 aaKnown RBP19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 CHMP2BQ9UQN3 213 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 EXOC1LA0A1B0GW35 172 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 IFNB1P01574 187 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 SLFN12LQ6IEE8 588 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 OR6J1Q8NGC5 347 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 BCAS3Q9H6U6 928 aa19.93■□□□□ 0.78
PPFIA1-202ENST00000389547 SLX4Q8IY92 1834 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 GLTPD2A6NH11 291 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 SUPT20HL2P0C7V6 817 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 USP4Q13107 963 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 RCN1Q15293 331 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 CCDC60Q8IWA6 550 aaPredicted RBP19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 PIP4K2CQ8TBX8 421 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 COPS5Q92905 334 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 ZNF653Q96CK0 615 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 TMEM237Q96Q45 408 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 PYGLP06737 847 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 CLCN3P51790 818 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 CACNA2D1P54289 1103 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 SGO2Q562F6 1265 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 ARSHQ5FYA8 562 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 ERMARDQ5T6L9 678 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 PASD1Q8IV76 773 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 TRAPPC12Q8WVT3 735 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 ANAPC5Q9UJX4 755 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 TNRC6CQ9HCJ0 1690 aaKnown RBP19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 VHLP40337 213 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 NSFP46459 744 aaKnown RBP19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 SPARCL1Q14515 664 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 HSP90AA5PQ58FG0 334 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 CWF19L1Q69YN2 538 aaKnown RBP19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 KRT39Q6A163 491 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 FAM81AQ8TBF8 368 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 POP1Q99575 1024 aaKnown RBP19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 PI4K2AQ9BTU6 479 aa19.92■□□□□ 0.78
PPFIA1-202ENST00000389547 SRRM3A6NNA2 597 aaPredicted RBP19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 PODXLO00592 558 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 TRPA1O75762 1119 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 KCNMA1Q12791 1236 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 TMC3Q7Z5M5 1100 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 TAB3Q8N5C8 712 aaPredicted RBP19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 FBXO25Q8TCJ0 367 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 RPF1Q9H9Y2 349 aaKnown RBP19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 SDCCAG8Q86SQ7 713 aaPredicted RBP19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 C4orf19Q8IY42 314 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 GPD1LQ8N335 351 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 MREGQ8N565 214 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 PAF1Q8N7H5 531 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 MAB21L3Q8N8X9 362 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 VAV3Q9UKW4 847 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 BLMHQ13867 455 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 GRAMD1BQ3KR37 738 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 ERP44Q9BS26 406 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 SMARCAD1Q9H4L7 1026 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 UBIAD1Q9Y5Z9 338 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 CLEC4DQ8WXI8 215 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 ANKRD36BP1Q96IX9 119 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 BEGAINQ9BUH8 593 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 GPBP1L1Q9HC44 474 aaPredicted RBP19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 TBX20Q9UMR3 447 aa19.91■□□□□ 0.78
PPFIA1-202ENST00000389547 CAPN9O14815 690 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 HAUS5O94927 633 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 OAZ1P54368 228 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms