RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 ZIM3Q96PE6 472 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 MRPL4Q9BYD3 311 aaKnown RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 ROPN1BQ9BZX4 212 aaPredicted RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 ROPN1Q9HAT0 212 aaPredicted RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 BLOC1S6Q9UL45 172 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 MTO1Q9Y2Z2 717 aaKnown RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 PP2D1A8MPX8 630 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 ANGPT2O15123 496 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 GPC3P51654 580 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 ZNF157P51786 506 aaPredicted RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 URGCPQ8TCY9 931 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 AGR3Q8TD06 166 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 HNRNPLLQ8WVV9 542 aaKnown RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 RBM12Q9NTZ6 932 aaKnown RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 GOLGA8RI6L899 631 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 STX3Q13277 289 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 TRADDQ15628 312 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 BTNL9Q6UXG8 535 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 ERO1BQ86YB8 467 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 SCN4BQ8IWT1 228 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 CMTM5Q96DZ9 223 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 ZFATQ9P243 1243 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 ERFP50548 548 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 ABCE1P61221 599 aaKnown RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 TRIP10Q15642 601 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 MTHFD1LQ6UB35 978 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 MOXD1Q6UVY6 613 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 SZRD1Q7Z422 152 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 PLD3Q8IV08 490 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 GPRC5AQ8NFJ5 357 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 ACAP3Q96P50 834 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 RBM15Q96T37 977 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNPH-201ENST00000381867 TMEM39BQ9GZU3 492 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 NEUROG2Q9H2A3 272 aa14.68□□□□□ -0.06
SNPH-201ENST00000381867 TRIM45Q9H8W5 580 aaPredicted RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 DBR1Q9UK59 544 aaKnown RBP14.68□□□□□ -0.06
SNPH-201ENST00000381867 POTEFA5A3E0 1075 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 KLHL2O95198 593 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 GH1P01241 217 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 NR1I3Q14994 352 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 SWSAP1Q6NVH7 229 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 POTEGQ6S5H5 508 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 POTEEQ6S8J3 1075 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 PATL1Q86TB9 770 aaKnown RBP14.67□□□□□ -0.06
SNPH-201ENST00000381867 GMCL1Q96IK5 515 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 IGF2BP3O00425 579 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNPH-201ENST00000381867 SLC16A3O15427 465 aaKnown RBP14.67□□□□□ -0.06
SNPH-201ENST00000381867 TDP2O95551 362 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 PRAMEP78395 509 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 C9orf131Q5VYM1 1079 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 SMARCAD1Q9H4L7 1026 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 RUBCNLQ9H714 662 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 EMSYQ7Z589 1322 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 F5H423 210 aaPredicted RBP14.67□□□□□ -0.06
SNPH-201ENST00000381867 DGAT1O75907 488 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 TRIM49P0CI25 452 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 TRIM49CP0CI26 452 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 KCNA2P16389 499 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 S100A5P33763 92 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 RFC5P40937 340 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 RECQLP46063 649 aaPredicted RBP14.67□□□□□ -0.06
SNPH-201ENST00000381867 GCLCP48506 637 aaPredicted RBP14.67□□□□□ -0.06
SNPH-201ENST00000381867 KIF2BQ8N4N8 673 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 OR2W6PQ8NHA6 318 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 NOD2Q9HC29 1040 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 MOSPD1Q9UJG1 213 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 MAGEB2O15479 319 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 AKAP10O43572 662 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 SERPINI2O75830 405 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 WDR47O94967 919 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 VHLP40337 213 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 EIF3EP60228 445 aaKnown RBP14.67□□□□□ -0.06
SNPH-201ENST00000381867 SNRPFP62306 86 aaKnown RBP14.67□□□□□ -0.06
SNPH-201ENST00000381867 FMR1Q06787 632 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNPH-201ENST00000381867 P3H1Q32P28 736 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 MMGT1Q8N4V1 131 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 TC2NQ8N9U0 490 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 BEST2Q8NFU1 509 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 FOXP3Q9BZS1 431 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 DLGAP2Q9P1A6 1054 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 PDP2Q9P2J9 529 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 CCL15-CCL14A0A0B4J2E2 113 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 E5RI56 91 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 APOL1O14791 398 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 CCL15Q16663 113 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 EFHC2Q5JST6 749 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 TAGAPQ8N103 731 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 NR1H4Q96RI1 486 aaPredicted RBP14.67□□□□□ -0.06
SNPH-201ENST00000381867 THTPAQ9BU02 230 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 JMJD4Q9H9V9 463 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 TSC22D4Q9Y3Q8 395 aa14.67□□□□□ -0.06
SNPH-201ENST00000381867 PJA2O43164 708 aa14.66□□□□□ -0.06
SNPH-201ENST00000381867 CDH2P19022 906 aaPredicted RBP14.66□□□□□ -0.06
SNPH-201ENST00000381867 KLRK1P26718 216 aa14.66□□□□□ -0.06
SNPH-201ENST00000381867 CDH6P55285 790 aa14.66□□□□□ -0.06
SNPH-201ENST00000381867 TSPY1Q01534 308 aa14.66□□□□□ -0.06
SNPH-201ENST00000381867 RBBP7Q16576 425 aa14.66□□□□□ -0.06
SNPH-201ENST00000381867 RCOR2Q8IZ40 523 aa14.66□□□□□ -0.06
SNPH-201ENST00000381867 KIRREL3Q8IZU9 778 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms