RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ELAVL2Q12926 359 aaKnown RBP16.65■□□□□ 0.26
PDGFB-202ENST00000381551 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 GRIN2CQ14957 1233 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 KRT31Q15323 416 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 MAN2A1Q16706 1144 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 VWA3BQ502W6 1294 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 POF1BQ8WVV4 589 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 SEMA4DQ92854 862 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 SUSD3Q96L08 255 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 XYLT2Q9H1B5 865 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 CHST7Q9NS84 486 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 STK39Q9UEW8 545 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 LIMA1Q9UHB6 759 aaKnown RBP16.65■□□□□ 0.26
PDGFB-202ENST00000381551 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDGFB-202ENST00000381551 M0QZQ0 153 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 P4HA2O15460 535 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 LRRN2O75325 713 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 SOD2P04179 222 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 PRKCSHP14314 528 aaPredicted RBP16.64■□□□□ 0.25
PDGFB-202ENST00000381551 ERVFC1P60507 584 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 SV2CQ496J9 727 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 MIIPQ5JXC2 388 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 FAM171A1Q5VUB5 890 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 APTXQ7Z2E3 356 aaKnown RBP16.64■□□□□ 0.25
PDGFB-202ENST00000381551 VPS52Q8N1B4 723 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 FBXL13Q8NEE6 735 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 TAF4BQ92750 862 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 SENP8Q96LD8 212 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 ZNF560Q96MR9 790 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 NDST4Q9H3R1 872 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 VRTNQ9H8Y1 702 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 RAB20Q9NX57 234 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 GDAP2Q9NXN4 497 aa16.64■□□□□ 0.25
PDGFB-202ENST00000381551 N4BP1O75113 896 aaKnown RBP16.63■□□□□ 0.25
PDGFB-202ENST00000381551 ASS1P00966 412 aaKnown RBP16.63■□□□□ 0.25
PDGFB-202ENST00000381551 FGFR3P22607 806 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 FXR1P51114 621 aaKnown RBP eCLIP16.63■□□□□ 0.25
PDGFB-202ENST00000381551 USP41Q3LFD5 358 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 KIAA0319Q5VV43 1072 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 DSTYKQ6XUX3 929 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 EHBP1Q8NDI1 1231 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 LMO3Q8TAP4 145 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 B3GALT6Q96L58 329 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 VPS16Q9H269 839 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 TAB2Q9NYJ8 693 aa16.63■□□□□ 0.25
PDGFB-202ENST00000381551 GOLGA6L19H0YKK7 550 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 CYB561D2O14569 222 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 SYN3O14994 580 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 CTSAP10619 480 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 PIK3CAP42336 1068 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 COPB1P53618 953 aaKnown RBP16.62■□□□□ 0.25
PDGFB-202ENST00000381551 TPM4P67936 248 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 MYL7Q01449 175 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 CETN1Q12798 172 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.62■□□□□ 0.25
PDGFB-202ENST00000381551 LIMS2Q7Z4I7 341 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 GAS2L3Q86XJ1 694 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 RNF214Q8ND24 703 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 ANKRD20A12PQ8NF67 263 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 GDPD5Q8WTR4 605 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 ELMO3Q96BJ8 720 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 PI4K2AQ9BTU6 479 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 HERC2P3Q9BVR0 1158 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 LMAN2LQ9H0V9 348 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 ZBP1Q9H171 429 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 PRDM12Q9H4Q4 367 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 TLR9Q9NR96 1032 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 PCDHB8Q9UN66 801 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 SNX9Q9Y5X1 595 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 PLXNA4Q9HCM2 1894 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 MYO9BQ13459 2157 aa16.62■□□□□ 0.25
PDGFB-202ENST00000381551 GTPBP10A4D1E9 387 aaKnown RBP16.61■□□□□ 0.25
PDGFB-202ENST00000381551 FSCN2O14926 492 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 LILRB3O75022 631 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 CXCL14O95715 111 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 TKTP29401 623 aaKnown RBP16.61■□□□□ 0.25
PDGFB-202ENST00000381551 GLUD2P49448 558 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 DSG1Q02413 1049 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 MRPL58Q14197 206 aaKnown RBP16.61■□□□□ 0.25
PDGFB-202ENST00000381551 ZNF699Q32M78 642 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 SPOPLQ6IQ16 392 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 DPH6Q7L8W6 267 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 TMC7Q7Z402 723 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 CEP57Q86XR8 500 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 GPR65Q8IYL9 337 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 APPL2Q8NEU8 664 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 LNX1Q8TBB1 728 aaPredicted RBP16.61■□□□□ 0.25
PDGFB-202ENST00000381551 FAM161BQ96MY7 647 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 TCF25Q9BQ70 676 aa16.61■□□□□ 0.25
PDGFB-202ENST00000381551 NGRNQ9NPE2 291 aaKnown RBP16.61■□□□□ 0.25
PDGFB-202ENST00000381551 TIMM13Q9Y5L4 95 aaPredicted RBP16.61■□□□□ 0.25
PDGFB-202ENST00000381551 TRANK1O15050 2925 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 SZT2Q5T011 3432 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 HUS1O60921 280 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 OAZ2O95190 189 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 CYP11A1P05108 521 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms