RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MIF4GDA9UHW6 222 aaKnown RBP14.67□□□□□ -0.06
SDC1-202ENST00000381150 TISP43B9A030 160 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 DCTN3O75935 186 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 SGPL1O95470 568 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 GNAZP19086 355 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 FYB2Q5VWT5 728 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 LDHDQ86WU2 507 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 GALNT15Q8N3T1 639 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 OGFOD1Q8N543 542 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 ASAP3Q8TDY4 903 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 STK32BQ9NY57 414 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 MRPL11Q9Y3B7 192 aaKnown RBP14.67□□□□□ -0.06
SDC1-202ENST00000381150 LRRC42Q9Y546 428 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 FER1L6Q2WGJ9 1857 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 GOLGA8IPA6NC78 632 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 GOLGA8JA6NMD2 632 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 TXNDC9O14530 226 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 BCRP11274 1271 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 PLS3P13797 630 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 VHLP40337 213 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 PRELPP51888 382 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 JAM2P57087 298 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 THOC5Q13769 683 aaKnown RBP14.67□□□□□ -0.06
SDC1-202ENST00000381150 ZYXQ15942 572 aaKnown RBP14.67□□□□□ -0.06
SDC1-202ENST00000381150 PKN2Q16513 984 aaKnown RBP14.67□□□□□ -0.06
SDC1-202ENST00000381150 NFIL3Q16649 462 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 LLGL2Q6P1M3 1020 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 ARHGAP22Q7Z5H3 698 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 FAM178BQ8IXR5 827 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 ARMCX1Q9P291 453 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 RNF8O76064 485 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 KRT5P13647 590 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 GAP43P17677 238 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 MUTP22033 750 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 ODR4Q5SWX8 454 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 RNF43Q68DV7 783 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 FAM160B2Q86V87 743 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 ANKMY2Q8IV38 441 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 SLC25A41Q8N5S1 370 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 HIPK4Q8NE63 616 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 SNF8Q96H20 258 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 FAM161BQ96MY7 647 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 RBM15Q96T37 977 aaKnown RBP eCLIP14.67□□□□□ -0.06
SDC1-202ENST00000381150 GORASP1Q9BQQ3 440 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 UNC45AQ9H3U1 944 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 DCLRE1BQ9H816 532 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 AAASQ9NRG9 546 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 ANAPC7Q9UJX3 599 aa14.67□□□□□ -0.06
SDC1-202ENST00000381150 DDX39AO00148 427 aaKnown RBP14.66□□□□□ -0.06
SDC1-202ENST00000381150 LIN7AO14910 233 aaPredicted RBP14.66□□□□□ -0.06
SDC1-202ENST00000381150 EIF3DO15371 548 aaKnown RBP eCLIP14.66□□□□□ -0.064e-8■■■□□ 16.7
SDC1-202ENST00000381150 SLC16A3O15427 465 aaKnown RBP14.66□□□□□ -0.06
SDC1-202ENST00000381150 MAP3K7O43318 606 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 HSD17B4P51659 736 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 DRG2P55039 364 aaKnown RBP14.66□□□□□ -0.06
SDC1-202ENST00000381150 IZUMO3Q5VZ72 239 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 LRMDAQ9H2I8 198 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 FBXO6Q9NRD1 293 aaPredicted RBP14.66□□□□□ -0.06
SDC1-202ENST00000381150 PCYOX1Q9UHG3 505 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 FEM1BQ9UK73 627 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 CCNB1P14635 433 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 HSPA6P17066 643 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 SCNN1BP51168 640 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 DLG4P78352 724 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 PDCD2Q16342 344 aaPredicted RBP14.66□□□□□ -0.06
SDC1-202ENST00000381150 LVRNQ6Q4G3 990 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.66□□□□□ -0.06
SDC1-202ENST00000381150 AGBL3Q8NEM8 1001 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 MKNK1Q9BUB5 465 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 STRA6Q9BX79 667 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 COL20A1Q9P218 1284 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 WDR35Q9P2L0 1181 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 PRKAG3Q9UGI9 489 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 NENFQ9UMX5 172 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 WASF2Q9Y6W5 498 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 EMSYQ7Z589 1322 aa14.66□□□□□ -0.06
SDC1-202ENST00000381150 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.65□□□□□ -0.06
SDC1-202ENST00000381150 DPEP1P16444 411 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ITGB5P18084 799 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 GSTT1P30711 240 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 CETN1Q12798 172 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 SPDYCQ5MJ68 293 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 SYCP2LQ5T4T6 812 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 MFSD5Q6N075 450 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ZNF720Q7Z2F6 126 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 MAIP1Q8WWC4 291 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 AGBL1Q96MI9 1066 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 PCMTD2Q9NV79 361 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 RHBDL2Q9NX52 303 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 HEY2Q9UBP5 337 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 FRMPD4Q14CM0 1322 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 WNT10BO00744 389 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ESRRAP11474 423 aaPredicted RBP14.65□□□□□ -0.06
SDC1-202ENST00000381150 RRM1P23921 792 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
SDC1-202ENST00000381150 MTMR2Q13614 643 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ARHGEF19Q8IW93 802 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 FBXO41Q8TF61 875 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 SLC7A6OSQ96CW6 309 aaPredicted RBP14.65□□□□□ -0.06
SDC1-202ENST00000381150 FAM84AQ96KN4 292 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms