RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 JOSD2Q8TAC2 188 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 FDXACB1Q9BRP7 624 aaPredicted RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 SYT11Q9BT88 431 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 OSBPL8Q9BZF1 889 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 SLITRK6Q9H5Y7 841 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 ANKEF1Q9NU02 776 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 SYNGAP1Q96PV0 1343 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 KCTD2Q14681 263 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 PLCB4Q15147 1175 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 KIZQ2M2Z5 673 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 MAP1SQ66K74 1059 aaPredicted RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 NPNTQ6UXI9 565 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 CCDC13Q8IYE1 715 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 CYP4X1Q8N118 509 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 ARHGEF2Q92974 986 aaKnown RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 NAP1L3Q99457 506 aaPredicted RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 STRA6Q9BX79 667 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 SPATC1LQ9H0A9 340 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 CISHQ9NSE2 258 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 FGFR1OP2Q9NVK5 253 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 HEY1Q9Y5J3 304 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 PRRC2BQ5JSZ5 2229 aaKnown RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 EXTL3O43909 919 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 NFICP08651 508 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 PDGFRBP09619 1106 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 KRT15P19012 456 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 LAMTOR4Q0VGL1 99 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 MMRN1Q13201 1228 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 PPP6R3Q5H9R7 873 aaPredicted RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 LIN9Q5TKA1 542 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 NUGGCQ68CJ6 796 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 DENND1BQ6P3S1 775 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 C1orf228Q6PIY5 440 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 NLRP7Q8WX94 980 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 TRIM56Q9BRZ2 755 aaKnown RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 CEP41Q9BYV8 373 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 NGRNQ9NPE2 291 aaKnown RBP13.47□□□□□ -0.25
TTC39B-202ENST00000380850 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
TTC39B-202ENST00000380850 GMNCA6NCL1 334 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 PSMA2P25787 234 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 PTGIRP43119 386 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 OGDHQ02218 1023 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 MAPK6Q16659 721 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 USP37Q86T82 979 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 TCP11Q8WWU5 503 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 NDRG1Q92597 394 aaKnown RBP13.46□□□□□ -0.25
TTC39B-202ENST00000380850 EPN3Q9H201 632 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 HAUS2Q9NVX0 235 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 KCND2Q9NZV8 630 aa13.46□□□□□ -0.25
TTC39B-202ENST00000380850 HMGB1P1B2RPK0 211 aaPredicted RBP13.46□□□□□ -0.26
TTC39B-202ENST00000380850 H0YGN5 161 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 ARSEP51690 589 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 BASP1P80723 227 aaKnown RBP13.46□□□□□ -0.26
TTC39B-202ENST00000380850 EFTUD2Q15029 972 aaKnown RBP eCLIP13.46□□□□□ -0.263e-12■■■■■ 83.7
TTC39B-202ENST00000380850 BBS9Q3SYG4 887 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 TADA2BQ86TJ2 420 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 ERICH1Q86X53 443 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 KIRREL3Q8IZU9 778 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 DDX1Q92499 740 aaKnown RBP13.46□□□□□ -0.26
TTC39B-202ENST00000380850 GPRASP2Q96D09 838 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 NFS1Q9Y697 457 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 NCANO14594 1321 aa13.46□□□□□ -0.26
TTC39B-202ENST00000380850 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 TCP11X1B4DZS4 312 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 SLC9A9Q8IVB4 645 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 RNF169Q8NCN4 708 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 TWNKQ96RR1 684 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 NRBP2Q9NSY0 501 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 SNCAIPQ9Y6H5 919 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 CLTAP09496 248 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 RFC1P35251 1148 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 ADCYAP1R1P41586 468 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 PSMC1P62191 440 aaKnown RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 ITIH3Q06033 890 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 IFRD2Q12894 506 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 PPP2R5DQ14738 602 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 C15orf59Q2T9L4 293 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 ZACNQ401N2 412 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 TBC1D1Q86TI0 1168 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 ZBED8Q8IZ13 594 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 RASGEF1CQ8N431 466 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 PIWIL1Q96J94 861 aaKnown RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 CD248Q9HCU0 757 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 METTL5Q9NRN9 209 aaKnown RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 PCDHB2Q9Y5E7 798 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 MYPNQ86TC9 1320 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 FARP2O94887 1054 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 STBD1O95210 358 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-202ENST00000380850 CETPP11597 493 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 CHRNA3P32297 505 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 GPC3P51654 580 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 OR6B2Q6IFH4 312 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 KDM7AQ6ZMT4 941 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 EFCAB13Q8IY85 973 aa13.45□□□□□ -0.26
TTC39B-202ENST00000380850 AFG1LQ8WV93 481 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms