RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 MAK16Q9BXY0 300 aaKnown RBP12.85□□□□□ -0.35
HERC6-203ENST00000380265 GLT8D2Q9H1C3 349 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 LMCD1Q9NZU5 365 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 ZNF142P52746 1687 aaPredicted RBP12.85□□□□□ -0.35
HERC6-203ENST00000380265 DSG1Q02413 1049 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 MAP7Q14244 749 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 CCDC110Q8TBZ0 833 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 CBWD1Q9BRT8 395 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 TUBB6Q9BUF5 446 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 OSBPL8Q9BZF1 889 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 TAS2R1Q9NYW7 299 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 SENP1Q9P0U3 644 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 SRP68Q9UHB9 627 aaKnown RBP12.85□□□□□ -0.35
HERC6-203ENST00000380265 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 TCEA3O75764 348 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 UFL1O94874 794 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 KITP10721 976 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 GZMAP12544 262 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 KRT10P13645 584 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 CCNFP41002 786 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 RTP1P59025 263 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 FMO1Q01740 532 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 KBTBD2Q8IY47 623 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 ETNPPLQ8TBG4 499 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 CLPTM1LQ96KA5 538 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 TIPINQ9BVW5 301 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 FAM192AQ9GZU8 254 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 ASCC2Q9H1I8 757 aaPredicted RBP12.85□□□□□ -0.35
HERC6-203ENST00000380265 PSMC3IPQ9P2W1 217 aaPredicted RBP12.85□□□□□ -0.35
HERC6-203ENST00000380265 STX18Q9P2W9 335 aaKnown RBP12.85□□□□□ -0.35
HERC6-203ENST00000380265 SH3BP1Q9Y3L3 701 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 CYP11B1P15538 503 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 RFX1P22670 979 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 NFIXQ14938 502 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 CMPK2Q5EBM0 449 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 RASSF3Q86WH2 238 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 PSPC1Q8WXF1 523 aaKnown RBP12.84□□□□□ -0.35
HERC6-203ENST00000380265 PTPRN2Q92932 1015 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 ABTB1Q969K4 478 aaPredicted RBP12.84□□□□□ -0.35
HERC6-203ENST00000380265 RILPQ96NA2 401 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 SERPINA10Q9UK55 444 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 SGK1O00141 431 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 MYL2P10916 166 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 FGFR1P11362 822 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 SPIRE1Q08AE8 756 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 EFTUD2Q15029 972 aaKnown RBP eCLIP12.84□□□□□ -0.35
HERC6-203ENST00000380265 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 TPTE2Q6XPS3 522 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 PASD1Q8IV76 773 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.84□□□□□ -0.35
HERC6-203ENST00000380265 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
HERC6-203ENST00000380265 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 MARCOQ9UEW3 520 aaPredicted RBP12.84□□□□□ -0.35
HERC6-203ENST00000380265 SERPINB13Q9UIV8 391 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 RPL26L1Q9UNX3 145 aaKnown RBP12.84□□□□□ -0.35
HERC6-203ENST00000380265 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
HERC6-203ENST00000380265 ALS2Q96Q42 1657 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 TAF1P21675 1872 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 MAGEB2O15479 319 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 ECE2O60344 883 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 GAS7O60861 476 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 CFBP00751 764 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 CENPUQ71F23 418 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 DENND1AQ8TEH3 1009 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 PYROXD1Q8WU10 500 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 FAM20AQ96MK3 541 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 TTC25Q96NG3 672 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 GALNT8Q9NY28 637 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 COL4A1P02462 1669 aa12.84□□□□□ -0.35
HERC6-203ENST00000380265 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.35
HERC6-203ENST00000380265 FCHO1O14526 889 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 SSTR1P30872 391 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 AP2B1P63010 937 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 ZNF568Q3ZCX4 644 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 SLFN13Q68D06 897 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 CCDC174Q6PII3 467 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 PALM2Q8IXS6 379 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 KRT82Q9NSB4 513 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 LNPEPQ9UIQ6 1025 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 NUMBLQ9Y6R0 609 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 DLEC1Q9Y238 1755 aa12.83□□□□□ -0.35
HERC6-203ENST00000380265 PIK3CDO00329 1044 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 PRPF4O43172 522 aaKnown RBP eCLIP12.83□□□□□ -0.36
HERC6-203ENST00000380265 MT-ND3P03897 115 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 CYP1A2P05177 515 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 WDR72Q3MJ13 1102 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 ZCCHC9Q8N567 271 aaKnown RBP12.83□□□□□ -0.36
HERC6-203ENST00000380265 GLIS1Q8NBF1 620 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 C11orf70Q9BRQ4 267 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 PREBQ9HCU5 417 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 GINM1Q9NU53 330 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 TRAFD1O14545 582 aaPredicted RBP12.83□□□□□ -0.36
HERC6-203ENST00000380265 LPXNO60711 386 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 MUTP22033 750 aa12.83□□□□□ -0.36
HERC6-203ENST00000380265 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms