RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 GABBR1Q9UBS5 961 aa4.4□□□□□ -1.7
BRCA2-201ENST00000380152 CPSF3Q9UKF6 684 aaKnown RBP4.4□□□□□ -1.7
BRCA2-201ENST00000380152 GRID1Q9ULK0 1009 aa4.4□□□□□ -1.7
BRCA2-201ENST00000380152 ANGPTL3Q9Y5C1 460 aa4.4□□□□□ -1.7
BRCA2-201ENST00000380152 USP31Q70CQ4 1352 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 PSAPP07602 524 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 KRT16P08779 473 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 NUDT2P50583 147 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 PTENP60484 403 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 TAP1Q03518 808 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CLEC4GQ6UXB4 293 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 ISLR2Q6UXK2 745 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 NLRP9Q7RTR0 991 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 MCPH1Q8NEM0 835 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 DHX35Q9H5Z1 703 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 SLIT1O75093 1534 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 F8VZ95 297 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 KRT75O95678 551 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CLPTM1O96005 669 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CALB2P22676 271 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 BTKQ06187 659 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 FLOT2Q14254 428 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 EDRF1Q3B7T1 1238 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 AADACL2Q6P093 401 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CCDC117Q8IWD4 279 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 FBXL16Q8N461 479 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CCNYL1Q8N7R7 359 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 RPS6KC1Q96S38 1066 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 SNX25Q9H3E2 840 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 TDRD3Q9H7E2 651 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CSADQ9Y600 493 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CD163L1Q9NR16 1453 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 XPO1O14980 1071 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 ALDH5A1P51649 535 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 EPC2Q52LR7 807 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CEP55Q53EZ4 464 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 FASTKD1Q53R41 847 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 TASP1Q9H6P5 420 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 RAVER2Q9HCJ3 691 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 AIPL1Q9NZN9 384 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 ZNF229Q9UJW7 825 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 PDE2AO00408 941 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 PECAM1P16284 738 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CRKP46108 304 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 PPP1R18Q6NYC8 613 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 IZUMO2Q6UXV1 221 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 DDIASQ8IXT1 998 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CDC26Q8NHZ8 85 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 NCLNQ969V3 563 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 CLMNQ96JQ2 1002 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 MON2Q7Z3U7 1717 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 NRXN1Q9ULB1 1477 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 TMEM253P0C7T8 217 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 TMED10P49755 219 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 JAK3P52333 1124 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 MRPS15P82914 257 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 STX3Q13277 289 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 ANGPTL8Q6UXH0 198 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 SLC13A5Q86YT5 568 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 SCUBE1Q8IWY4 988 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 HACE1Q8IYU2 909 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 PDCD6IPQ8WUM4 868 aaKnown RBP4.4□□□□□ -1.71
BRCA2-201ENST00000380152 C15orf41Q9Y2V0 281 aa4.4□□□□□ -1.71
BRCA2-201ENST00000380152 DIP2AQ14689 1571 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 DIP2BQ9P265 1576 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 LMTK3Q96Q04 1460 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 CCDC78A2IDD5 438 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 OPLAHO14841 1288 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 EIF3DO15371 548 aaKnown RBP eCLIP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 DGKIO75912 1065 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 RAD17O75943 681 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 WEE2P0C1S8 567 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 GPC3P51654 580 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 NSUN2Q08J23 767 aaKnown RBP eCLIP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ARL13BQ3SXY8 428 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SPIRE2Q8WWL2 714 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 POP1Q99575 1024 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 DDX50Q9BQ39 737 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 GOLGA4Q13439 2230 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ADGRB1O14514 1584 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SNUPNO95149 360 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 CHEK2O96017 543 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ACADSP16219 412 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TAC1P20366 129 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 KPNA2P52292 529 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TSTA3Q13630 321 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 FAM47CQ5HY64 1035 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 PCNX4Q63HM2 1172 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 C16orf86Q6ZW13 317 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 NIM1KQ8IY84 436 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 KLHL4Q9C0H6 718 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ARMCX1Q9P291 453 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 CST8O60676 142 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 GRAP2O75791 330 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ASNSP08243 561 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 EPHB2P29323 1055 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 DDR1Q08345 913 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 NBPF20Q3BBV1 942 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 NUP93Q8N1F7 819 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms