RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 KIAA0232Q92628 1395 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 UQCRBP14927 111 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 RBL2Q08999 1139 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 TIGD7Q6NT04 549 aaPredicted RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 SLC2A3P11169 496 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 LSP1P33241 339 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 ZNF394Q53GI3 561 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 TTC23Q5W5X9 447 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 DCP1BQ8IZD4 617 aaKnown RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 VPS51Q9UID3 782 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 ANAPC2Q9UJX6 822 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 STX3Q13277 289 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 LRRC41Q15345 812 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 RRAGDQ9NQL2 400 aaPredicted RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 ARHGEF12Q9NZN5 1544 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 KLHL2O95198 593 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 PGK2P07205 417 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 GSTM1P09488 218 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 POU4F1Q01851 419 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 DDI1Q8WTU0 396 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 DCTN4Q9UJW0 460 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 IRF1P10914 325 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 SERPINB1P30740 379 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 KIZQ2M2Z5 673 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 MBD2Q9UBB5 411 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 ADORA1P30542 326 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 HIRAP54198 1017 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 STARD3Q14849 445 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 LRRC8DQ7L1W4 858 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 LRRC49Q8IUZ0 686 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 HOMEZQ8IX15 550 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 RNF146Q9NTX7 359 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 CROCC2H7BZ55 1655 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 ODC1P11926 461 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 RIN2Q8WYP3 895 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 EPS8L2Q9H6S3 715 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 CEP72Q9P209 647 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 GH2P01242 217 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 QARSP47897 775 aaKnown RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 GPC1P35052 558 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 PEG10Q86TG7 708 aaKnown RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 MRFAP1Q9Y605 127 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 A0A087X0T9 212 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 ATXN7L3BQ96GX2 97 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 RBAKQ9NYW8 714 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 FBXL21Q9UKT6 434 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 GRK4P32298 578 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 RUBCNQ92622 972 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 DPF3Q92784 378 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 EME1Q96AY2 570 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 PDZK1P1A8MUH7 402 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 PLCL1Q15111 1095 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 SYDE1Q6ZW31 735 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 CCDC103Q8IW40 242 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 IL18RAPO95256 599 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 PPP2R1BP30154 601 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 PSMC5P62195 406 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 FAM45BPQ6NSW5 357 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 PHACTR1Q9C0D0 580 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 MORC2Q9Y6X9 1032 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 NOTCH3Q9UM47 2321 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 PALMO75781 387 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 UPP2O95045 317 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 HIC1Q14526 733 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 FBXO42Q6P3S6 717 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 RNF180Q86T96 592 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 RHOT1Q8IXI2 618 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 ZSCAN18Q8TBC5 510 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 ASCC2Q9H1I8 757 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 NEUROD4Q9HD90 331 aa11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 AGO2Q9UKV8 859 aaKnown RBP11.73□□□□□ -0.53
PTCHD1-201ENST00000379361 STRNO43815 780 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 PDHA1P08559 390 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 PRR23AA6NEV1 266 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 APRTP07741 180 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 NFIAQ12857 509 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 PRKAA1Q13131 559 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 DNAL1Q4LDG9 190 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 PPP1R36Q96LQ0 422 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 FANCEQ9HB96 536 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 ACTR2P61160 394 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 SETD3Q86TU7 594 aaPredicted RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 FAM9CQ8IZT9 166 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 MAGEB2O15479 319 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 MGAT5BQ3V5L5 792 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 CRLS1Q9UJA2 301 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 SPATA18Q8TC71 538 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 ATP6V1HQ9UI12 483 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 TTC7AQ9ULT0 858 aaPredicted RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 ARFGEF3Q5TH69 2177 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 CFAP73A6NFT4 308 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 SAC3D1A6NKF1 404 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms