RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TNFAIP3P21580 790 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 LRPAP1P30533 357 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 CLCN1P35523 988 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 AGMOQ6ZNB7 445 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 C18orf25Q96B23 403 aaPredicted RBP26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 GAD1Q99259 594 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 SYT11Q9BT88 431 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 PCDHA13Q9Y5I0 950 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 A0A087X0T9 212 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 ARL5CA6NH57 179 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 C9IYK1 514 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 PTGESO14684 152 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 KRT86O43790 486 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 FAM228BP0C875 321 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 MAGEA1P43355 309 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 GUCY2FP51841 1108 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 TMEM270Q6UE05 265 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 ZNF598Q86UK7 904 aaKnown RBP26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 ELMO3Q96BJ8 720 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 PAWRQ96IZ0 340 aaKnown RBP26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 CISHQ9NSE2 258 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 TBX21Q9UL17 535 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 ATP11BQ9Y2G3 1177 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 PIRO00625 290 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 INPPL1O15357 1258 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 CLTBP09497 229 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 FAM189BP81408 668 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 KIF5AQ12840 1032 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 PDCD11Q14690 1871 aaKnown RBP26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 NYAP1Q6ZVC0 841 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 RBBP8NLQ8NC74 664 aaPredicted RBP26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 ZFP42Q96MM3 310 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 CXCL16Q9H2A7 254 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 NAGPAQ9UK23 515 aa26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 NOCTQ9UK39 431 aaKnown RBP26.28■■□□□ 1.8
ECHDC3-201ENST00000379215 ZNF263O14978 683 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 CXCL10P02778 98 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 RFC2P35250 354 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 CDR2Q01850 454 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 CYP27A1Q02318 531 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 NAB2Q15742 525 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 SV2CQ496J9 727 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 SLC47A2Q86VL8 602 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 RNF169Q8NCN4 708 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 LPPQ93052 612 aa26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 ELAC1Q9H777 363 aaKnown RBP26.27■■□□□ 1.8
ECHDC3-201ENST00000379215 ZNF132P52740 706 aa26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 GRIK3Q13003 919 aa26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 SCARA3Q6AZY7 606 aa26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 ALKBH5Q6P6C2 394 aaKnown RBP26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 SLC30A5Q8TAD4 765 aa26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 RSPH1Q8WYR4 309 aa26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 C16orf45Q96MC5 204 aaPredicted RBP26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 RRAGDQ9NQL2 400 aaPredicted RBP26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 TMEM39AQ9NV64 488 aa26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 TANC1Q9C0D5 1861 aa26.26■■□□□ 1.79
ECHDC3-201ENST00000379215 DDX3XO00571 662 aaKnown RBP eCLIP26.25■■□□□ 1.793e-9■■■■■ 58.2
ECHDC3-201ENST00000379215 PAX3P23760 479 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 RPL9P32969 192 aaKnown RBP26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 TAF6P49848 677 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 CCDC122Q5T0U0 273 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 GLB1LQ6UWU2 654 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 SCARA5Q6ZMJ2 495 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 NOP9Q86U38 636 aaKnown RBP26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 GLYCTKQ8IVS8 523 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 RPUSD2Q8IZ73 545 aaKnown RBP26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 GSTCDQ8NEC7 633 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 DBF4BQ8NFT6 615 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 DNAI2Q9GZS0 605 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 LZTFL1Q9NQ48 299 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 INTUQ9ULD6 942 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 POLIQ9UNA4 740 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 MEIS3P2A8K0S8 358 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 LINC01599Q8WXQ3 324 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 SEPT11Q9NVA2 429 aaKnown RBP26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 TMEM161AQ9NX61 479 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 MYO1AQ9UBC5 1043 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 NENFQ9UMX5 172 aa26.25■■□□□ 1.79
ECHDC3-201ENST00000379215 DNAH12Q6ZR08 3092 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 PJA2O43164 708 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 KIF5CO60282 957 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 WEE2P0C1S8 567 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 CD58P19256 250 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 GNA15P30679 374 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 SCNN1GP51170 649 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 GPNMBQ14956 572 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 PPP1R2P3Q6NXS1 205 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 TRIM72Q6ZMU5 477 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 RTN4RL1Q86UN2 441 aaPredicted RBP26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 LNX1Q8TBB1 728 aaPredicted RBP26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 DDX27Q96GQ7 796 aaKnown RBP26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 UROC1Q96N76 676 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 PPP1R12CQ9BZL4 782 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 MCOLN1Q9GZU1 580 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 WNT8AQ9H1J5 351 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 GDAP2Q9NXN4 497 aa26.24■■□□□ 1.79
ECHDC3-201ENST00000379215 PAEPP09466 180 aa26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 GZMAP12544 262 aa26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 SOX4Q06945 474 aaPredicted RBP26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 INCA1Q0VD86 236 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms