RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PIK3R5Q8WYR1 880 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 PPP2R3CQ969Q6 453 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 SENP8Q96LD8 212 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 FNIP2Q9P278 1114 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 ARMCX3Q9UH62 379 aaPredicted RBP20.2■□□□□ 0.82
SSU72-203ENST00000378725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.19■□□□□ 0.82
SSU72-203ENST00000378725 KPNA7A9QM74 516 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 TRIM49P0CI25 452 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 TRIM49CP0CI26 452 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 HYAL1Q12794 435 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 STX1AQ16623 288 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 SV2CQ496J9 727 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 PDXDC1Q6P996 788 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 DSTYKQ6XUX3 929 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 KLHL5Q96PQ7 755 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 CDCA3Q99618 268 aaPredicted RBP20.19■□□□□ 0.82
SSU72-203ENST00000378725 TLE6Q9H808 572 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.19■□□□□ 0.82
SSU72-203ENST00000378725 GDAP2Q9NXN4 497 aa20.19■□□□□ 0.82
SSU72-203ENST00000378725 C2CD2LO14523 706 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 STX10O60499 249 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 VNN1O95497 513 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 STAU1O95793 577 aaKnown RBP20.18■□□□□ 0.82
SSU72-203ENST00000378725 CNPP09543 421 aaKnown RBP20.18■□□□□ 0.82
SSU72-203ENST00000378725 TYMPP19971 482 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 TYRO3Q06418 890 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 MYO1EQ12965 1108 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 COL19A1Q14993 1142 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 DUSP6Q16828 381 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 ANKS3Q6ZW76 656 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 IRF2BP1Q8IU81 584 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 MICALL1Q8N3F8 863 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 APPL2Q8NEU8 664 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 ENOX1Q8TC92 643 aaKnown RBP20.18■□□□□ 0.82
SSU72-203ENST00000378725 SLC35C1Q96A29 364 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 HPDLQ96IR7 371 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 FUCA2Q9BTY2 467 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 EMILIN2Q9BXX0 1053 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 TMEM8AQ9HCN3 771 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 R3HCC1Q9Y3T6 440 aaKnown RBP20.18■□□□□ 0.82
SSU72-203ENST00000378725 BACE2Q9Y5Z0 518 aa20.18■□□□□ 0.82
SSU72-203ENST00000378725 ARHGEF37A1IGU5 675 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 CYB561D2O14569 222 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 PER2O15055 1255 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 NCK2O43639 380 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 TBC1D4O60343 1298 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 CLASP2O75122 1294 aaKnown RBP20.17■□□□□ 0.82
SSU72-203ENST00000378725 PHACTR2O75167 634 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 OAZ2O95190 189 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 CYP11A1P05108 521 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 ATICP31939 592 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 GCLMP48507 274 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 NRIP1P48552 1158 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 CREMQ03060 361 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 BIRC3Q13489 604 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 TRPC3Q13507 836 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 KCNC3Q14003 757 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 CCDC85BQ15834 202 aaPredicted RBP20.17■□□□□ 0.82
SSU72-203ENST00000378725 CCDC40Q4G0X9 1142 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 VARS2Q5ST30 1063 aaKnown RBP20.17■□□□□ 0.82
SSU72-203ENST00000378725 PRSS55Q6UWB4 352 aaPredicted RBP20.17■□□□□ 0.82
SSU72-203ENST00000378725 C11orf57Q6ZUT1 292 aaPredicted RBP20.17■□□□□ 0.82
SSU72-203ENST00000378725 RBM23Q86U06 439 aaKnown RBP20.17■□□□□ 0.82
SSU72-203ENST00000378725 MAFAQ8NHW3 353 aaPredicted RBP20.17■□□□□ 0.82
SSU72-203ENST00000378725 XYLT2Q9H1B5 865 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 THAP9Q9H5L6 903 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 VRTNQ9H8Y1 702 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 MTRRQ9UBK8 725 aa20.17■□□□□ 0.82
SSU72-203ENST00000378725 TRANK1O15050 2925 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 TEX28O15482 410 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 C1RP00736 705 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 CCDC192P0DO97 292 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 ODC1P11926 461 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 CA8P35219 290 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 GTF2F1P35269 517 aaKnown RBP eCLIP20.16■□□□□ 0.823e-7■□□□□ 9.7
SSU72-203ENST00000378725 MYL6P60660 151 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 NCOA4Q13772 614 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 PSMD5Q16401 504 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 CTC1Q2NKJ3 1217 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 KRT39Q6A163 491 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 LIMS2Q7Z4I7 341 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 TRIM59Q8IWR1 403 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 EFHBQ8N7U6 833 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 CLSTN3Q9BQT9 956 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 DSEQ9UL01 958 aa20.16■□□□□ 0.82
SSU72-203ENST00000378725 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 H7C4K7 107 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 PMM2O15305 246 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 ADAM15Q13444 863 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 TPD52L1Q16890 204 aaPredicted RBP20.15■□□□□ 0.82
SSU72-203ENST00000378725 SGSM1Q2NKQ1 1148 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 TMEM184AQ6ZMB5 413 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 DPH6Q7L8W6 267 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 SLC22A17Q8WUG5 538 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 PPM1EQ8WY54 764 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 OXCT2Q9BYC2 517 aaPredicted RBP20.15■□□□□ 0.82
SSU72-203ENST00000378725 IGFLR1Q9H665 355 aa20.15■□□□□ 0.82
SSU72-203ENST00000378725 TIMM13Q9Y5L4 95 aaPredicted RBP20.15■□□□□ 0.82
SSU72-203ENST00000378725 ATG2AQ2TAZ0 1938 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 SYCE3A1L190 88 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms