RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 GGPS1O95749 300 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 GAS8O95995 478 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 BRD2P25440 801 aaKnown RBP16.34■□□□□ 0.21
RER1-203ENST00000378513 SFNP31947 248 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 TMEM132BQ14DG7 1078 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 EMC2Q15006 297 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 CRELD2Q6UXH1 353 aaPredicted RBP16.34■□□□□ 0.21
RER1-203ENST00000378513 NIPA1Q7RTP0 329 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 RBBP8NLQ8NC74 664 aaPredicted RBP16.34■□□□□ 0.21
RER1-203ENST00000378513 PRCCQ92733 491 aaPredicted RBP16.34■□□□□ 0.21
RER1-203ENST00000378513 FBXL18Q96ME1 805 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 MSTO1Q9BUK6 570 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 ATP6V0A4Q9HBG4 840 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 NAALADL1Q9UQQ1 740 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 ZNF148Q9UQR1 794 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 ZNF646O15015 1829 aaPredicted RBP16.34■□□□□ 0.21
RER1-203ENST00000378513 UPP2O95045 317 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 GJB1P08034 283 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 KCNT1Q5JUK3 1230 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 TRPM8Q7Z2W7 1104 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 RTKN2Q8IZC4 609 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 C4orf33Q8N1A6 199 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 ATP6V0A1Q93050 837 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 PPP1R16BQ96T49 567 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 C12orf65Q9H3J6 166 aaKnown RBP16.34■□□□□ 0.21
RER1-203ENST00000378513 SAYSD1Q9NPB0 183 aa16.34■□□□□ 0.21
RER1-203ENST00000378513 A1CFQ9NQ94 594 aaKnown RBP16.34■□□□□ 0.21
RER1-203ENST00000378513 CNOT7Q9UIV1 285 aaKnown RBP16.34■□□□□ 0.21
RER1-203ENST00000378513 ATXN2Q99700 1313 aaKnown RBP16.33■□□□□ 0.21
RER1-203ENST00000378513 K7ERI5 159 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 STRN3Q13033 797 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 RHBDF2Q6PJF5 856 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 MFSD7Q6UXD7 560 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 MON1BQ7L1V2 547 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 ANKMY2Q8IV38 441 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 TMC2Q8TDI7 906 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 LPAR1Q92633 364 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 MIEF2Q96C03 454 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 MCEEQ96PE7 176 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 HACL1Q9UJ83 578 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.21
RER1-203ENST00000378513 CSDE1O75534 798 aaKnown RBP16.33■□□□□ 0.2
RER1-203ENST00000378513 NOP14P78316 857 aaKnown RBP16.33■□□□□ 0.2
RER1-203ENST00000378513 CUL2Q13617 745 aa16.33■□□□□ 0.2
RER1-203ENST00000378513 ZACNQ401N2 412 aa16.33■□□□□ 0.2
RER1-203ENST00000378513 TAOK1Q7L7X3 1001 aa16.33■□□□□ 0.2
RER1-203ENST00000378513 DPH6Q7L8W6 267 aa16.33■□□□□ 0.2
RER1-203ENST00000378513 PIGWQ7Z7B1 504 aa16.33■□□□□ 0.2
RER1-203ENST00000378513 DEPTORQ8TB45 409 aa16.33■□□□□ 0.2
RER1-203ENST00000378513 RBM15Q96T37 977 aaKnown RBP eCLIP16.33■□□□□ 0.23e-7■■□□□ 13.6
RER1-203ENST00000378513 R3HDMLQ9H3Y0 253 aa16.33■□□□□ 0.2
RER1-203ENST00000378513 PIK3R2O00459 728 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 DGAT1O75907 488 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 PROSCO94903 275 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 C4BPAP04003 597 aaKnown RBP16.32■□□□□ 0.2
RER1-203ENST00000378513 PSAPP07602 524 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 SRGAP2CP0DJJ0 459 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 ACO1P21399 889 aaKnown RBP16.32■□□□□ 0.2
RER1-203ENST00000378513 GLRA2P23416 452 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 GTF2H1P32780 548 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 MIS18BP1Q6P0N0 1132 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 DEFB132Q7Z7B7 95 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 RMDN2Q96LZ7 410 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 PLVAPQ9BX97 442 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.32■□□□□ 0.2
RER1-203ENST00000378513 STX2P32856 288 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 NOMO3P69849 1222 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 OGDHQ02218 1023 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 GCNT1Q02742 428 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 NAIF1Q69YI7 327 aaPredicted RBP16.32■□□□□ 0.2
RER1-203ENST00000378513 MICALL2Q8IY33 904 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 ATL2Q8NHH9 583 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 TMEM121Q9BTD3 319 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 MTMR12Q9C0I1 747 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 ACTR5Q9H9F9 607 aaPredicted RBP16.32■□□□□ 0.2
RER1-203ENST00000378513 STK32BQ9NY57 414 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 EXTL3O43909 919 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 SNX3O60493 162 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 KRT1P04264 644 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 MYBL1P10243 752 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 ITIH2P19823 946 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 SAMD3Q8N6K7 520 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 RUNDC3BQ96NL0 473 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 TGS1Q96RS0 853 aaKnown RBP16.32■□□□□ 0.2
RER1-203ENST00000378513 NOD2Q9HC29 1040 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 HOMER3Q9NSC5 361 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 WHRNQ9P202 907 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 ARHGAP28Q9P2N2 729 aa16.32■□□□□ 0.2
RER1-203ENST00000378513 RASA4BC9J798 803 aa16.31■□□□□ 0.2
RER1-203ENST00000378513 RASA4O43374 803 aa16.31■□□□□ 0.2
RER1-203ENST00000378513 ELF3P78545 371 aaPredicted RBP16.31■□□□□ 0.2
RER1-203ENST00000378513 GPS1Q13098 491 aa16.31■□□□□ 0.2
RER1-203ENST00000378513 CLUL1Q15846 466 aa16.31■□□□□ 0.2
RER1-203ENST00000378513 TRMT10CQ7L0Y3 403 aaKnown RBP16.31■□□□□ 0.2
RER1-203ENST00000378513 LRRC71Q8N4P6 559 aa16.31■□□□□ 0.2
RER1-203ENST00000378513 C12orf50Q8NA57 414 aaPredicted RBP16.31■□□□□ 0.2
RER1-203ENST00000378513 NSUN6Q8TEA1 469 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms