RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 FYNP06241 537 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 RALBP11234 206 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 HUNKP57058 714 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 BAATQ14032 418 aaPredicted RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 TCP11X1B4DZS4 312 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 RANBP1P43487 201 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 SH3BGRP55822 239 aaPredicted RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 E4F1Q66K89 784 aaPredicted RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 KLF6Q99612 283 aaPredicted RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 ASB14A6NK59 587 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 AP3B2Q13367 1082 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 GNASQ5JWF2 1037 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 BLOC1S5Q8TDH9 187 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 SGF29Q96ES7 293 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 MED8Q96G25 268 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 CCL15-CCL14A0A0B4J2E2 113 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 DAB1O75553 588 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 AKR1B1P15121 316 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 ALOX15P16050 662 aaPredicted RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 SERPINB4P48594 390 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 CCL15Q16663 113 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 SCFD1Q8WVM8 642 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 KIAA1586Q9HCI6 787 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 HEG1Q9ULI3 1381 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 CSNK2BP67870 215 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 IER5Q5VY09 327 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 TDRKHQ9Y2W6 561 aaKnown RBP17.09■□□□□ 0.33
RGP1-201ENST00000378078 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 KPNA1P52294 538 aaPredicted RBP17.09■□□□□ 0.33
RGP1-201ENST00000378078 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.09■□□□□ 0.33
RGP1-201ENST00000378078 WNK4Q96J92 1243 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 STRNO43815 780 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 CPSF4O95639 269 aaKnown RBP17.09■□□□□ 0.33
RGP1-201ENST00000378078 MBL2P11226 248 aaPredicted RBP17.09■□□□□ 0.33
RGP1-201ENST00000378078 ACTR2P61160 394 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
RGP1-201ENST00000378078 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
RGP1-201ENST00000378078 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 SCP2P22307 547 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 CNGA3Q16281 694 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 BTN2A1Q7KYR7 527 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 GGA3Q9NZ52 723 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 CRLS1Q9UJA2 301 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 PLXNC1O60486 1568 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 GSTM1P09488 218 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 HPGDP15428 266 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 TNNI3P19429 210 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 KRT78Q8N1N4 520 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 CNBD2Q96M20 576 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 DEPDC7Q96QD5 511 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 OSBPL9Q96SU4 736 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 FAM129AQ9BZQ8 928 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 COL15A1P39059 1388 aa17.09■□□□□ 0.33
RGP1-201ENST00000378078 SMNDC1O75940 238 aaKnown RBP eCLIP17.08■□□□□ 0.33
RGP1-201ENST00000378078 ABCB1P08183 1280 aaPredicted RBP17.08■□□□□ 0.33
RGP1-201ENST00000378078 MYL2P10916 166 aa17.08■□□□□ 0.33
RGP1-201ENST00000378078 TP53BP2Q13625 1128 aa17.08■□□□□ 0.33
RGP1-201ENST00000378078 GAS2L3Q86XJ1 694 aa17.08■□□□□ 0.33
RGP1-201ENST00000378078 C4orf33Q8N1A6 199 aa17.08■□□□□ 0.33
RGP1-201ENST00000378078 FLCNQ8NFG4 579 aa17.08■□□□□ 0.33
RGP1-201ENST00000378078 RNF103O00237 685 aa17.08■□□□□ 0.33
RGP1-201ENST00000378078 CENPPQ6IPU0 288 aa17.08■□□□□ 0.33
RGP1-201ENST00000378078 XPO1O14980 1071 aaKnown RBP17.08■□□□□ 0.32
RGP1-201ENST00000378078 FOXN1O15353 648 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 PMPCBO75439 489 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 ASS1P00966 412 aaKnown RBP17.08■□□□□ 0.32
RGP1-201ENST00000378078 KCNB1Q14721 858 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 TDRD10Q5VZ19 366 aaKnown RBP17.08■□□□□ 0.32
RGP1-201ENST00000378078 RHOT1Q8IXI2 618 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 CAMKK1Q8N5S9 505 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 UTP6Q9NYH9 597 aaKnown RBP17.08■□□□□ 0.32
RGP1-201ENST00000378078 RPS6KB2Q9UBS0 482 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 A0A1W2PQ27 194 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 A0A1W2PQ64 194 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 A0A1W2PQD8 194 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 EIF3BP55884 814 aaKnown RBP17.08■□□□□ 0.32
RGP1-201ENST00000378078 SCARA3Q6AZY7 606 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 SNX17Q15036 470 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 PARVBQ9HBI1 364 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 AMACRQ9UHK6 382 aa17.08■□□□□ 0.32
RGP1-201ENST00000378078 GUCA1AP43080 201 aaPredicted RBP17.07■□□□□ 0.32
RGP1-201ENST00000378078 RAP1GAPP47736 663 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 ALDH9A1P49189 494 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 C16orf62Q7Z3J2 963 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 MFSD1Q9H3U5 465 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 CHMP2BQ9UQN3 213 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 MYL4P12829 197 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 PDGFRAP16234 1089 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 SFNP31947 248 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 PLA2G4AP47712 749 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 RESTQ13127 1097 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 FAXCQ5TGI0 409 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 WWOXQ9NZC7 414 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 CDC27P30260 824 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 GPC1P35052 558 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 CEP55Q53EZ4 464 aa17.07■□□□□ 0.32
RGP1-201ENST00000378078 ZC2HC1CQ53FD0 456 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms