RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TEX12Q9BXU0 123 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 EML4Q9HC35 981 aaKnown RBP14.31□□□□□ -0.12
GPC6-201ENST00000377047 ARHGAP10A1A4S6 786 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 NDUFS3O75489 264 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 FGFR4P22455 802 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 GALCP54803 685 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 COBLL1Q53SF7 1204 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 ELMO2Q96JJ3 720 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 METTL5Q9NRN9 209 aaKnown RBP14.31□□□□□ -0.12
GPC6-201ENST00000377047 AMACRQ9UHK6 382 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 TBX20Q9UMR3 447 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 FRMPD1Q5SYB0 1578 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 AP3B1O00203 1094 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 FRMD3A2A2Y4 597 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 GGCXP38435 758 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 PDCLQ13371 301 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 BEND6Q5SZJ8 279 aaPredicted RBP14.31□□□□□ -0.12
GPC6-201ENST00000377047 MEI1Q5TIA1 1274 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 ARRDC4Q8NCT1 418 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 DDNO94850 711 aaPredicted RBP14.31□□□□□ -0.12
GPC6-201ENST00000377047 VTNP04004 478 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 GPD1P21695 349 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 P3H1Q32P28 736 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 CYP4A22Q5TCH4 519 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 RAB6BQ9NRW1 208 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 ADA2Q9NZK5 511 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 KIF17Q9P2E2 1029 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 PCDHGB4Q9UN71 923 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 ATP11BQ9Y2G3 1177 aa14.31□□□□□ -0.12
GPC6-201ENST00000377047 SRGNP10124 158 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 SNRPFP62306 86 aaKnown RBP14.3□□□□□ -0.12
GPC6-201ENST00000377047 SLC18A3Q16572 532 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 FBXO38Q6PIJ6 1188 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 DPF2Q92785 391 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 POLR3CQ9BUI4 534 aaPredicted RBP14.3□□□□□ -0.12
GPC6-201ENST00000377047 TUBE1Q9UJT0 475 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 POLR1AO95602 1720 aaPredicted RBP14.3□□□□□ -0.12
GPC6-201ENST00000377047 DIP2BQ9P265 1576 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 MTF1Q14872 753 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 ZNF484Q5JVG2 852 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 ZNF507Q8TCN5 953 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 YME1L1Q96TA2 773 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 ARHGEF38Q9NXL2 777 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 SLC37A4O43826 429 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 PYGBP11216 843 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 HMOX2P30519 316 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 MAP2K2P36507 400 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 CLCN3P51790 818 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 EFHC1Q5JVL4 640 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 PPP1R36Q96LQ0 422 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
GPC6-201ENST00000377047 UBQLN1Q9UMX0 589 aaKnown RBP14.3□□□□□ -0.12
GPC6-201ENST00000377047 GAS2O43903 313 aaKnown RBP14.3□□□□□ -0.12
GPC6-201ENST00000377047 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
GPC6-201ENST00000377047 KDM4CQ9H3R0 1056 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 ADAMTS13Q76LX8 1427 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 H7C4K7 107 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 SLC9A1P19634 815 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 BFSP2Q13515 415 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 LRRC14Q15048 493 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 KIZQ2M2Z5 673 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 EDRF1Q3B7T1 1238 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 ARHGAP18Q8N392 663 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 SCFD1Q8WVM8 642 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 ARHGEF26Q96DR7 871 aa14.3□□□□□ -0.12
GPC6-201ENST00000377047 XPO7Q9UIA9 1087 aaKnown RBP14.3□□□□□ -0.12
GPC6-201ENST00000377047 H0Y626 953 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 TADA3O75528 432 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 PTPRN2Q92932 1015 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 MS4A14Q96JA4 679 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 ASPSCR1Q9BZE9 553 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 ACTR5Q9H9F9 607 aaPredicted RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 CEP170BQ9Y4F5 1589 aaPredicted RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 VCAM1P19320 739 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 CXCL9Q07325 125 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 SMTNL2Q2TAL5 461 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 EPC2Q52LR7 807 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 MTHFD1LQ6UB35 978 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 CPB2Q96IY4 423 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 RRP15Q9Y3B9 282 aaKnown RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 DNAJC8O75937 253 aaPredicted RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 VEGFAP15692 232 aaPredicted RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 AARSP49588 968 aaKnown RBP eCLIP14.29□□□□□ -0.12
GPC6-201ENST00000377047 HIBCHQ6NVY1 386 aaPredicted RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 STARD7Q9NQZ5 370 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 LATS2Q9NRM7 1088 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 TEKT2Q9UIF3 430 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 PCDHB2Q9Y5E7 798 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 ZC3H11AO75152 810 aaKnown RBP eCLIP14.29□□□□□ -0.12
GPC6-201ENST00000377047 CDH18Q13634 790 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 SPDYAQ5MJ70 313 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 PCSK9Q8NBP7 692 aaKnown RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 IPMKQ8NFU5 416 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 ZC3H13Q5T200 1668 aaKnown RBP14.29□□□□□ -0.12
GPC6-201ENST00000377047 SPDYE5A6NIY4 337 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 SPDYE7PQ495Y7 208 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 CHP1Q99653 195 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 RUSC1Q9BVN2 902 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms