RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 LAMP2P13473 410 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 RFX1P22670 979 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 GBP2P32456 591 aaPredicted RBP10.5□□□□□ -0.73
C9orf85-202ENST00000377027 NAMPTP43490 491 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 PRPF4BQ13523 1007 aaKnown RBP10.5□□□□□ -0.73
C9orf85-202ENST00000377027 TTC38Q5R3I4 469 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 TREML4Q6UXN2 200 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 CYP26C1Q6V0L0 522 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 GET4Q7L5D6 327 aaPredicted RBP10.5□□□□□ -0.73
C9orf85-202ENST00000377027 FRMD5Q7Z6J6 570 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 IGSF22Q8N9C0 903 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 GPR152Q8TDT2 470 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 FGF14Q92915 247 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 CCDC97Q96F63 343 aaPredicted RBP10.5□□□□□ -0.73
C9orf85-202ENST00000377027 C8orf76Q96K31 380 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 CCDC43Q96MW1 224 aaKnown RBP10.5□□□□□ -0.73
C9orf85-202ENST00000377027 BHMT2Q9H2M3 363 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
C9orf85-202ENST00000377027 PLEKHA4Q9H4M7 779 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 PTPRHQ9HD43 1115 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.5□□□□□ -0.73
C9orf85-202ENST00000377027 DLGAP2Q9P1A6 1054 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 IGSF9Q9P2J2 1179 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 LIMCH1Q9UPQ0 1083 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 SSX2IPQ9Y2D8 614 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 PCDHB6Q9Y5E3 794 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 SF3B1O75533 1304 aaKnown RBP eCLIP10.5□□□□□ -0.73
C9orf85-202ENST00000377027 CACNA1IQ9P0X4 2223 aa10.5□□□□□ -0.73
C9orf85-202ENST00000377027 ARHGEF35A5YM69 484 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 E9PMD0 336 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 I3L4J1 428 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 TADA2AO75478 443 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 GLULP15104 373 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 LIG1P18858 919 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 FGFR3P22607 806 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 CDC25AP30304 524 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 CLCNKBP51801 687 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 NCBP1Q09161 790 aaKnown RBP10.49□□□□□ -0.73
C9orf85-202ENST00000377027 ORC2Q13416 577 aaPredicted RBP10.49□□□□□ -0.73
C9orf85-202ENST00000377027 TRIM29Q14134 588 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 PSMD5Q16401 504 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 C8orf34Q49A92 452 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 CRTC2Q53ET0 693 aaPredicted RBP10.49□□□□□ -0.73
C9orf85-202ENST00000377027 FAM171A1Q5VUB5 890 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 TMEM214Q6NUQ4 689 aaKnown RBP10.49□□□□□ -0.73
C9orf85-202ENST00000377027 PARM1Q6UWI2 310 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 GRASPQ7Z6J2 395 aaPredicted RBP10.49□□□□□ -0.73
C9orf85-202ENST00000377027 ZBTB8OSQ8IWT0 167 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 HACE1Q8IYU2 909 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 ZMAT2Q96NC0 199 aaKnown RBP10.49□□□□□ -0.73
C9orf85-202ENST00000377027 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
C9orf85-202ENST00000377027 TTPALQ9BTX7 342 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 RUSC1Q9BVN2 902 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 C2orf40Q9H1Z8 148 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 CDT1Q9H211 546 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 MFSD1Q9H3U5 465 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 HCFC1R1Q9NWW0 138 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 CA14Q9ULX7 337 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 GDAQ9Y2T3 454 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 NUMBLQ9Y6R0 609 aa10.49□□□□□ -0.73
C9orf85-202ENST00000377027 A6NJY4 79 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 TMEM189-UBE2V1I3L0A0 370 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 CCL16O15467 120 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 LRRN2O75325 713 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 THP07101 528 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 C8AP07357 584 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 SRFP11831 508 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 MUTP22033 750 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 U2AF2P26368 475 aaKnown RBP eCLIP10.48□□□□□ -0.731e-7■■■■■ 32.1
C9orf85-202ENST00000377027 TKTP29401 623 aaKnown RBP10.48□□□□□ -0.73
C9orf85-202ENST00000377027 CCT6AP40227 531 aaKnown RBP10.48□□□□□ -0.73
C9orf85-202ENST00000377027 BRCC3P46736 316 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 ANGPT1Q15389 498 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 MAPK6Q16659 721 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 UPP1Q16831 310 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 XKR4Q5GH76 650 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 LCE2AQ5TA79 106 aaPredicted RBP10.48□□□□□ -0.73
C9orf85-202ENST00000377027 ATF7IP2Q5U623 682 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 ALKAL1Q6UXT8 129 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 DTWD2Q8NBA8 298 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 ITFG1Q8TB96 612 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 LRRC15Q8TF66 581 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 DDX19AQ9NUU7 478 aaKnown RBP10.48□□□□□ -0.73
C9orf85-202ENST00000377027 ARHGAP28Q9P2N2 729 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 MTRRQ9UBK8 725 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 WNT16Q9UBV4 365 aa10.48□□□□□ -0.73
C9orf85-202ENST00000377027 PTPRZ1P23471 2315 aaPredicted RBP10.47□□□□□ -0.73
C9orf85-202ENST00000377027 TICRRQ7Z2Z1 1910 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 SHISA7A6NL88 538 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 CDK2AP1O14519 115 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 TBC1D4O60343 1298 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 WFS1O76024 890 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 PROZP22891 400 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 NPTX2P47972 431 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 TRAPPC10P48553 1259 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 RBM25P49756 843 aaKnown RBP10.47□□□□□ -0.73
C9orf85-202ENST00000377027 RAB33AQ14088 237 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 SLC5A9Q2M3M2 681 aa10.47□□□□□ -0.73
C9orf85-202ENST00000377027 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.47□□□□□ -0.73
C9orf85-202ENST00000377027 CEP57Q86XR8 500 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms