RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MCOLN2Q8IZK6 566 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 RFWD2Q8NHY2 731 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 SH2D3AQ9BRG2 576 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 ZNF577Q9BSK1 485 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 OSBPL8Q9BZF1 889 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 VPS37BQ9H9H4 285 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 RPL26L1Q9UNX3 145 aaKnown RBP17.48■□□□□ 0.39
TRIM39-201ENST00000376656 DDTLA6NHG4 134 aaPredicted RBP17.48■□□□□ 0.39
TRIM39-201ENST00000376656 PIK3CDO00329 1044 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 KRT5P13647 590 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 CNGA1P29973 690 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 TAS2R40P59535 323 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 ROR2Q01974 943 aaKnown RBP17.48■□□□□ 0.39
TRIM39-201ENST00000376656 RCN2Q14257 317 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 C12orf56Q8IXR9 622 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 LARSQ9P2J5 1176 aaKnown RBP17.48■□□□□ 0.39
TRIM39-201ENST00000376656 CD58P19256 250 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRIM39-201ENST00000376656 TAS1R2Q8TE23 839 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 ARL8BQ9NVJ2 186 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 ETS1P14921 441 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 SLC1A1P43005 524 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 KPNB1Q14974 876 aaKnown RBP17.47■□□□□ 0.39
TRIM39-201ENST00000376656 ACSBG2Q5FVE4 666 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 SPDYAQ5MJ70 313 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 GALNT15Q8N3T1 639 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 SCG3Q8WXD2 468 aaKnown RBP17.47■□□□□ 0.39
TRIM39-201ENST00000376656 KIFAP3Q92845 792 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 SAR1AQ9NR31 198 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 PCDHAC2Q9Y5I4 1007 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 UNGP13051 313 aaPredicted RBP17.47■□□□□ 0.39
TRIM39-201ENST00000376656 LMNB2Q03252 620 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 FAM84AQ96KN4 292 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 C12orf65Q9H3J6 166 aaKnown RBP17.47■□□□□ 0.39
TRIM39-201ENST00000376656 KLHL11Q9NVR0 708 aa17.47■□□□□ 0.39
TRIM39-201ENST00000376656 UMODL1Q5DID0 1318 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 SIPA1L1O43166 1804 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 ADRA1DP25100 572 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 RXRBP28702 533 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 KRT39Q6A163 491 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 APLFQ8IW19 511 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-201ENST00000376656 NT5C1BQ96P26 610 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 PKD2L1Q9P0L9 805 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 WDR35Q9P2L0 1181 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 LRCH1Q9Y2L9 728 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 CFAP69A5D8W1 941 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 DNALI1O14645 258 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-201ENST00000376656 PMM2O15305 246 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 ATP9AO75110 1047 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 KRT4P19013 534 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 CRY2Q49AN0 593 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 FYB2Q5VWT5 728 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 FOXB2Q5VYV0 432 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 HAUS6Q7Z4H7 955 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 HOMEZQ8IX15 550 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 IFT43Q96FT9 208 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 PRR11Q96HE9 360 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-201ENST00000376656 GMCL1Q96IK5 515 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 VCXQ9H320 206 aa17.46■□□□□ 0.39
TRIM39-201ENST00000376656 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-201ENST00000376656 PIAS1O75925 651 aa17.46■□□□□ 0.38
TRIM39-201ENST00000376656 PROSCO94903 275 aa17.46■□□□□ 0.38
TRIM39-201ENST00000376656 SNRNP35Q16560 246 aaKnown RBP17.46■□□□□ 0.38
TRIM39-201ENST00000376656 CEP55Q53EZ4 464 aa17.46■□□□□ 0.38
TRIM39-201ENST00000376656 DTX3LQ8TDB6 740 aa17.46■□□□□ 0.38
TRIM39-201ENST00000376656 BTBD10Q9BSF8 475 aa17.46■□□□□ 0.38
TRIM39-201ENST00000376656 PI4K2AQ9BTU6 479 aa17.46■□□□□ 0.38
TRIM39-201ENST00000376656 AVENQ9NQS1 362 aaPredicted RBP17.46■□□□□ 0.38
TRIM39-201ENST00000376656 SENP1Q9P0U3 644 aa17.46■□□□□ 0.38
TRIM39-201ENST00000376656 USTQ9Y2C2 406 aa17.46■□□□□ 0.38
TRIM39-201ENST00000376656 CAPN9O14815 690 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 GSC2O15499 205 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 BANF1O75531 89 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 SSR1P43307 286 aaKnown RBP17.45■□□□□ 0.38
TRIM39-201ENST00000376656 GPC3P51654 580 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 ZBED8Q8IZ13 594 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
TRIM39-201ENST00000376656 TTC25Q96NG3 672 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 WDR11Q9BZH6 1224 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 FOXP3Q9BZS1 431 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 DNPEPQ9ULA0 475 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 SLC16A4O15374 487 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 PIK3CAP42336 1068 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 GCLCP48506 637 aaPredicted RBP17.45■□□□□ 0.38
TRIM39-201ENST00000376656 NOP14P78316 857 aaKnown RBP17.45■□□□□ 0.38
TRIM39-201ENST00000376656 JAG1P78504 1218 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 KAZNQ674X7 775 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 ZC3H18Q86VM9 953 aaKnown RBP17.45■□□□□ 0.38
TRIM39-201ENST00000376656 GMCL1P1Q8NEA9 526 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 PTCD3Q96EY7 689 aaKnown RBP17.45■□□□□ 0.38
TRIM39-201ENST00000376656 TEKT3Q9BXF9 490 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 ANKFY1Q9P2R3 1169 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 MYPNQ86TC9 1320 aa17.45■□□□□ 0.38
TRIM39-201ENST00000376656 A0A0G2JND7 137 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 CCDC22O60826 627 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 TBX10O75333 385 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 KRT10P13645 584 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 EFTUD2Q15029 972 aaKnown RBP eCLIP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms