RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 MICAL1Q8TDZ2 1067 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 XPNPEP1Q9NQW7 623 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 C4AP0C0L4 1744 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 GOLGA8CPA6NN73 597 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 MDH1BQ5I0G3 518 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 ATF7IP2Q5U623 682 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 DCLK2Q8N568 766 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 PORCNQ9H237 461 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 TCP11X1B4DZS4 312 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 CAPN9O14815 690 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 DHX15O43143 795 aaKnown RBP12.36□□□□□ -0.43
DDR1-227ENST00000376570 CST8O60676 142 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 KRT3P12035 628 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 COILP38432 576 aaPredicted RBP12.36□□□□□ -0.43
DDR1-227ENST00000376570 LAMTOR4Q0VGL1 99 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 ASTE1Q2TB18 679 aaPredicted RBP12.36□□□□□ -0.43
DDR1-227ENST00000376570 C12orf29Q8N999 325 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 OSMRQ99650 979 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 MKNK1Q9BUB5 465 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 SLC13A1Q9BZW2 595 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 CISHQ9NSE2 258 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 FGFR1OP2Q9NVK5 253 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 HESX1Q9UBX0 185 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 C4BP0C0L5 1744 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 INSRRP14616 1297 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 MDH1P40925 334 aaKnown RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 TAS2R40P59535 323 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 ZNF844Q08AG5 666 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 NEDD9Q14511 834 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 HYIQ5T013 277 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 TWF2Q6IBS0 349 aaKnown RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 FAM71DQ8N9W8 422 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 ZNF473Q8WTR7 871 aaKnown RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 SYN2Q92777 582 aaPredicted RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 TTC17Q96AE7 1141 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 SMYD2Q9NRG4 433 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 H0Y3Z8 333 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 PIK3CDO00329 1044 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 CDC25CP30307 473 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 CHKAP35790 457 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 ACAD10Q6JQN1 1059 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 PRELID2Q8N945 189 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 ZNF606Q8WXB4 792 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 PPP1R36Q96LQ0 422 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 RBM15Q96T37 977 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDR1-227ENST00000376570 MARCOQ9UEW3 520 aaPredicted RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 PJA2O43164 708 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 SKAP2O75563 359 aaPredicted RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 HNRNPH3P31942 346 aaKnown RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 BPIFB4P59827 614 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 OVGP1Q12889 678 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 MFSD7Q6UXD7 560 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 EPM2AIP1Q7L775 607 aaPredicted RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 DHX35Q9H5Z1 703 aaKnown RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 CHMP2BQ9UQN3 213 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 PIN4Q9Y237 131 aaKnown RBP12.35□□□□□ -0.43
DDR1-227ENST00000376570 PCDHB2Q9Y5E7 798 aa12.35□□□□□ -0.43
DDR1-227ENST00000376570 EXTL3O43909 919 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 PHF2O75151 1096 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 DESP17661 470 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 ALDH5A1P51649 535 aaPredicted RBP12.34□□□□□ -0.43
DDR1-227ENST00000376570 CAPSQ13938 189 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 GLE1Q53GS7 698 aaKnown RBP12.34□□□□□ -0.43
DDR1-227ENST00000376570 ADAM32Q8TC27 787 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 MRPL47Q9HD33 250 aaKnown RBP12.34□□□□□ -0.43
DDR1-227ENST00000376570 KNL1Q8NG31 2342 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 MEFVO15553 781 aaPredicted RBP12.34□□□□□ -0.43
DDR1-227ENST00000376570 BEX3Q00994 111 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 TTC27Q6P3X3 843 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 KCNV2Q8TDN2 545 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 KAT2BQ92831 832 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 GMNCA6NCL1 334 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 A8MXQ7 604 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 F7P08709 466 aaPredicted RBP12.34□□□□□ -0.43
DDR1-227ENST00000376570 OSBPP22059 807 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 HADHQ16836 314 aaKnown RBP12.34□□□□□ -0.43
DDR1-227ENST00000376570 C15orf59Q2T9L4 293 aaPredicted RBP12.34□□□□□ -0.43
DDR1-227ENST00000376570 DCAF12L1Q5VU92 463 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 PYROXD1Q8WU10 500 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 CXorf56Q9H5V9 222 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 SMYD3Q9H7B4 428 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 ANKEF1Q9NU02 776 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
DDR1-227ENST00000376570 GON4LQ3T8J9 2241 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 PDGFRAP16234 1089 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 TTLL4Q14679 1199 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 SNCBQ16143 134 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 CCL15Q16663 113 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 SLFN12LQ6IEE8 588 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 NPNTQ6UXI9 565 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 RHOT1Q8IXI2 618 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 KIAA0319LQ8IZA0 1049 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms