RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PPEF2O14830 753 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 CASP14P31944 242 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 GSDMDP57764 484 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 TNNC1P63316 161 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 CUL2Q13617 745 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 IQCEQ6IPM2 695 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 FAM117BQ6P1L5 589 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 RRAGAQ7L523 313 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 FMNL3Q8IVF7 1028 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 TMEM130Q8N3G9 435 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 CPLX3Q8WVH0 158 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 SPAG5Q96R06 1193 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 ZBED2Q9BTP6 218 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.6■■□□□ 1.532e-6■■■■■ 149.1
HLA-C-202ENST00000376237 INSL6Q9Y581 213 aa24.6■■□□□ 1.53
HLA-C-202ENST00000376237 AKR1B15C9JRZ8 316 aaPredicted RBP24.59■■□□□ 1.53
HLA-C-202ENST00000376237 TMEM189-UBE2V1I3L0A0 370 aa24.59■■□□□ 1.53
HLA-C-202ENST00000376237 B3GAT3O94766 335 aa24.59■■□□□ 1.53
HLA-C-202ENST00000376237 ATP2A2P16615 1042 aaKnown RBP24.59■■□□□ 1.53
HLA-C-202ENST00000376237 OR1G1P47890 313 aa24.59■■□□□ 1.53
HLA-C-202ENST00000376237 FXR1P51114 621 aaKnown RBP eCLIP24.59■■□□□ 1.53
HLA-C-202ENST00000376237 HTRA4P83105 476 aaPredicted RBP24.59■■□□□ 1.53
HLA-C-202ENST00000376237 BTG3Q14201 252 aaPredicted RBP24.59■■□□□ 1.53
HLA-C-202ENST00000376237 PAN2Q504Q3 1202 aaKnown RBP24.59■■□□□ 1.53
HLA-C-202ENST00000376237 GJB7Q6PEY0 223 aa24.59■■□□□ 1.53
HLA-C-202ENST00000376237 HERC6Q8IVU3 1022 aa24.59■■□□□ 1.53
HLA-C-202ENST00000376237 CYP3A43Q9HB55 503 aa24.59■■□□□ 1.53
HLA-C-202ENST00000376237 NLRC4Q9NPP4 1024 aa24.59■■□□□ 1.53
HLA-C-202ENST00000376237 NXF1Q9UBU9 619 aaKnown RBP24.59■■□□□ 1.53
HLA-C-202ENST00000376237 YWHAEP62258 255 aaKnown RBP24.58■■□□□ 1.53
HLA-C-202ENST00000376237 RAPGEF1Q13905 1077 aa24.58■■□□□ 1.53
HLA-C-202ENST00000376237 DPH6Q7L8W6 267 aa24.58■■□□□ 1.53
HLA-C-202ENST00000376237 TMCO2Q7Z6W1 182 aaPredicted RBP24.58■■□□□ 1.53
HLA-C-202ENST00000376237 TTC39CQ8N584 583 aa24.58■■□□□ 1.53
HLA-C-202ENST00000376237 PAAF1Q9BRP4 392 aa24.58■■□□□ 1.53
HLA-C-202ENST00000376237 COLEC11Q9BWP8 271 aa24.58■■□□□ 1.53
HLA-C-202ENST00000376237 BCO2Q9BYV7 579 aa24.58■■□□□ 1.53
HLA-C-202ENST00000376237 DNAJB4Q9UDY4 337 aa24.58■■□□□ 1.53
HLA-C-202ENST00000376237 FAM163BP0C2L3 166 aa24.57■■□□□ 1.52
HLA-C-202ENST00000376237 KRT9P35527 623 aa24.57■■□□□ 1.52
HLA-C-202ENST00000376237 AARSP49588 968 aaKnown RBP eCLIP24.57■■□□□ 1.52
HLA-C-202ENST00000376237 BAP1Q92560 729 aa24.57■■□□□ 1.52
HLA-C-202ENST00000376237 KREMEN1Q96MU8 473 aa24.57■■□□□ 1.52
HLA-C-202ENST00000376237 RAD9AQ99638 391 aa24.57■■□□□ 1.52
HLA-C-202ENST00000376237 GDF15Q99988 308 aa24.57■■□□□ 1.52
HLA-C-202ENST00000376237 FAN1Q9Y2M0 1017 aa24.57■■□□□ 1.52
HLA-C-202ENST00000376237 SNX9Q9Y5X1 595 aa24.57■■□□□ 1.52
HLA-C-202ENST00000376237 TDRD15B5MCY1 1934 aaKnown RBP24.57■■□□□ 1.52
HLA-C-202ENST00000376237 ARHGEF37A1IGU5 675 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 NRP1O14786 923 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 B4GALT3O60512 393 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 MFAP3LO75121 409 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 ASPAP45381 313 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 ALDH7A1P49419 539 aaKnown RBP24.56■■□□□ 1.52
HLA-C-202ENST00000376237 DRAP1Q14919 205 aaPredicted RBP24.56■■□□□ 1.52
HLA-C-202ENST00000376237 ARHGAP44Q17R89 818 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 TSR1Q2NL82 804 aaKnown RBP24.56■■□□□ 1.52
HLA-C-202ENST00000376237 ELMO3Q96BJ8 720 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 RNPC3Q96LT9 517 aaKnown RBP24.56■■□□□ 1.52
HLA-C-202ENST00000376237 MMS19Q96T76 1030 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 CWH43Q9H720 699 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 CACNG4Q9UBN1 327 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 SPTLC1O15269 473 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 HUS1O60921 280 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 GALTP07902 379 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 STAT1P42224 750 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 JAM2P57087 298 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 ARID5BQ14865 1188 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 C3orf58Q8NDZ4 430 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 OR8K1Q8NGG5 319 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 SHC3Q92529 594 aa24.56■■□□□ 1.52
HLA-C-202ENST00000376237 SYN2Q92777 582 aaPredicted RBP24.56■■□□□ 1.52
HLA-C-202ENST00000376237 F8VZ95 297 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 RNF225M0QZC1 329 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-202ENST00000376237 TRAPPC3O43617 180 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 BCAR1P56945 870 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 C9orf50Q5SZB4 431 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 PDXDC1Q6P996 788 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 CCDC186Q7Z3E2 898 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 TOP6BLQ8N6T0 577 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 KAT5Q92993 513 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 UBE2OQ9C0C9 1292 aaKnown RBP24.55■■□□□ 1.52
HLA-C-202ENST00000376237 AJAP1Q9UKB5 411 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-202ENST00000376237 POLIQ9UNA4 740 aa24.55■■□□□ 1.52
HLA-C-202ENST00000376237 FNDC1Q4ZHG4 1894 aaPredicted RBP24.54■■□□□ 1.52
HLA-C-202ENST00000376237 LRRC53A6NM62 1247 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 H0YGN5 161 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 TLL1O43897 1013 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 TADA2AO75478 443 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 KIF4AO95239 1232 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 CCDC172P0C7W6 258 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 LAG3P18627 525 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 SLC11A1P49279 550 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 ADKP55263 362 aaKnown RBP24.54■■□□□ 1.52
HLA-C-202ENST00000376237 SHHQ15465 462 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 SPOUT1Q5T280 376 aaKnown RBP24.54■■□□□ 1.52
HLA-C-202ENST00000376237 DSTYKQ6XUX3 929 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 TC2NQ8N9U0 490 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 APPL2Q8NEU8 664 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 RABGGTAQ92696 567 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms