RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 MAIP1Q8WWC4 291 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 MAML1Q92585 1016 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 MRRFQ96E11 262 aaKnown RBP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 RBM15Q96T37 977 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 EXTL3O43909 919 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 PEX10O60683 326 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 CDH16O75309 829 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 NQO1P15559 274 aaKnown RBP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 TAC1P20366 129 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 CAV1Q03135 178 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 KAZNQ674X7 775 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 MIS18BP1Q6P0N0 1132 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 USP37Q86T82 979 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 RHOT1Q8IXI2 618 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 KATNAL2Q8IYT4 538 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 ABRAQ8N0Z2 381 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 LPAR1Q92633 364 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 PRCCQ92733 491 aaPredicted RBP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 ACSF2Q96CM8 615 aaPredicted RBP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 STAMBPL1Q96FJ0 436 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 C17orf75Q9HAS0 396 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 DNPEPQ9ULA0 475 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 ARL2BPQ9Y2Y0 163 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 STX2P32856 288 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 MAGEA4P43358 317 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 PSMC4P43686 418 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 PSMD6Q15008 389 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 WDR44Q5JSH3 913 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 TXNRD3NBQ6F5E7 133 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 PLEKHA7Q6IQ23 1121 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 CAPN12Q6ZSI9 719 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZNF677Q86XU0 584 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZNF526Q8TF50 670 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 TMEM143Q96AN5 459 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 FNBP1Q96RU3 617 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 RPAP3Q9H6T3 665 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 KIF9Q9HAQ2 790 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 CYP26B1Q9NR63 512 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 MAP3K20Q9NYL2 800 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 NUB1Q9Y5A7 615 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 PCDHB4Q9Y5E5 795 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 WDR81Q562E7 1941 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 RASA4BC9J798 803 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 VWA5AO00534 786 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 RASA4O43374 803 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 PSTPIP1O43586 416 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 SPAG7O75391 227 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 DGAT1O75907 488 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 EDN1P05305 212 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 KRT16P08779 473 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 ATP5DP30049 168 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 LIG4P49917 911 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 COPS2P61201 443 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 PRKCEQ02156 737 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 MTM1Q13496 603 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 CUL2Q13617 745 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 TMED2Q15363 201 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 FAM47EQ6ZV65 393 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 GSTA5Q7RTV2 222 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 OR5B17Q8NGF7 314 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 GIMAP7Q8NHV1 300 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 SENP7Q9BQF6 1050 aa13.15□□□□□ -0.3
TNFSF13B-201ENST00000375887 CFAP73A6NFT4 308 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 PIAS1O75925 651 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 HARSP12081 509 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 GNA15P30679 374 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 SLC8A1P32418 973 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 NFX1Q12986 1120 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 RIPK1Q13546 671 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 MTERF2Q49AM1 385 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 RELL1Q8IUW5 271 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 EXD1Q8NHP7 514 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 AGAP11Q8TF27 550 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 TRIM11Q96F44 468 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 MAGEB18Q96M61 343 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 RNF146Q9NTX7 359 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 DOCK5Q9H7D0 1870 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 GSTTP1A0A1W2PQM5 241 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 ATP4AP20648 1035 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 BPIFB4P59827 614 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 TLDC1Q6P9B6 456 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 ZCCHC9Q8N567 271 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 TAB3Q8N5C8 712 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 MTMR14Q8NCE2 650 aa13.14□□□□□ -0.31
TNFSF13B-201ENST00000375887 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms