RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TNFAIP3P21580 790 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 WDR4P57081 412 aaKnown RBP13.72□□□□□ -0.21
MSH5-204ENST00000375755 SESN3P58005 492 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 STRN3Q13033 797 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 SIX1Q15475 284 aaPredicted RBP13.72□□□□□ -0.21
MSH5-204ENST00000375755 CYP1B1Q16678 543 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 IRGCQ6NXR0 463 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 ARHGEF18Q6ZSZ5 1173 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 CPNE8Q86YQ8 564 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
MSH5-204ENST00000375755 LRRC37BQ96QE4 947 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 PDCD2LQ9BRP1 358 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 TUFT1Q9NNX1 390 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.72□□□□□ -0.21
MSH5-204ENST00000375755 USP20Q9Y2K6 914 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 ASTN1O14525 1302 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 MIF4GDA9UHW6 222 aaKnown RBP13.71□□□□□ -0.21
MSH5-204ENST00000375755 SMAPO00193 183 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 PDXKO00764 312 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 NVLO15381 856 aaKnown RBP13.71□□□□□ -0.21
MSH5-204ENST00000375755 CHRNB2P17787 502 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 DSG3P32926 999 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 SP4Q02446 784 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 SEL1L2Q5TEA6 688 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 ARHGEF16Q5VV41 709 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 PCNX4Q63HM2 1172 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 MIER3Q7Z3K6 550 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 MCF2L2Q86YR7 1114 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 B4GALNT2Q8NHY0 566 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 CLMNQ96JQ2 1002 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 PAIP2Q9BPZ3 127 aaKnown RBP13.71□□□□□ -0.21
MSH5-204ENST00000375755 STK33Q9BYT3 514 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 METTL14Q9HCE5 456 aaKnown RBP13.71□□□□□ -0.21
MSH5-204ENST00000375755 CTTNBP2NLQ9P2B4 639 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 SNCAIPQ9Y6H5 919 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 WDR90Q96KV7 1748 aa13.71□□□□□ -0.21
MSH5-204ENST00000375755 CALUO43852 315 aaPredicted RBP13.71□□□□□ -0.22
MSH5-204ENST00000375755 TTC4O95801 387 aa13.71□□□□□ -0.22
MSH5-204ENST00000375755 CCNE2O96020 404 aa13.71□□□□□ -0.22
MSH5-204ENST00000375755 DNAJC3Q13217 504 aa13.71□□□□□ -0.22
MSH5-204ENST00000375755 FIZ1Q96SL8 496 aa13.71□□□□□ -0.22
MSH5-204ENST00000375755 VCXQ9H320 206 aa13.71□□□□□ -0.22
MSH5-204ENST00000375755 AS3MTQ9HBK9 375 aa13.71□□□□□ -0.22
MSH5-204ENST00000375755 USH1CQ9Y6N9 552 aa13.71□□□□□ -0.22
MSH5-204ENST00000375755 GTPBP10A4D1E9 387 aaKnown RBP13.7□□□□□ -0.22
MSH5-204ENST00000375755 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
MSH5-204ENST00000375755 COMTP21964 271 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 TMEM63BQ5T3F8 832 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 C11orf63Q6NUN7 778 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 RHBDF2Q6PJF5 856 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 CATSPERGQ6ZRH7 1159 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 SLC13A5Q86YT5 568 aaPredicted RBP13.7□□□□□ -0.22
MSH5-204ENST00000375755 DAW1Q8N136 415 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 PWWP2AQ96N64 755 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 SLCO1B3Q9NPD5 702 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 NAALADL1Q9UQQ1 740 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 ZMYM2Q9UBW7 1377 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 TISP43B9A030 160 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 MAPK13O15264 365 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 RGS20O76081 388 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 ECEL1O95672 775 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 GGPS1O95749 300 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 MOGSQ13724 837 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 MESDQ14696 234 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 KHDC1Q4VXA5 237 aaKnown RBP13.7□□□□□ -0.22
MSH5-204ENST00000375755 ZC3H12AQ5D1E8 599 aaKnown RBP13.7□□□□□ -0.22
MSH5-204ENST00000375755 RFWD3Q6PCD5 774 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 STARD13Q9Y3M8 1113 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 ADGRA3Q8IWK6 1321 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 OTOFQ9HC10 1997 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
MSH5-204ENST00000375755 TGFB1I1O43294 461 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 FAM13AO94988 1023 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 CUL3Q13618 768 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 RCN2Q14257 317 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 PRUNE1Q86TP1 453 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 LRRC8CQ8TDW0 803 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 SLC20A1Q8WUM9 679 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 NRG4Q8WWG1 115 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 DCLRE1BQ9H816 532 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 PHTF1Q9UMS5 762 aa13.7□□□□□ -0.22
MSH5-204ENST00000375755 LCTP09848 1927 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
MSH5-204ENST00000375755 SOX10P56693 466 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 IL9RQ01113 521 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 KRT17Q04695 432 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 ARHGAP44Q17R89 818 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 PPP1R21Q6ZMI0 780 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 ARHGAP22Q7Z5H3 698 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 RHOT2Q8IXI1 618 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 SH3TC2Q8TF17 1288 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 FGD4Q96M96 766 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 TYW1Q9NV66 732 aaKnown RBP13.69□□□□□ -0.22
MSH5-204ENST00000375755 NINJ2Q9NZG7 142 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 LGALS13Q9UHV8 139 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms