RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 ASAP2O43150 1006 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 DNAJC8O75937 253 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-202ENST00000375597 FAM155BO75949 473 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 ALDH3A1P30838 453 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 PARD3BQ8TEW8 1205 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 PYROXD1Q8WU10 500 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 ATXN7L3BQ96GX2 97 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 RILPQ96NA2 401 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 MXRA8Q9BRK3 442 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 TBX20Q9UMR3 447 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 HEY1Q9Y5J3 304 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 MAD1L1Q9Y6D9 718 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 SCN7AQ01118 1682 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 CCDC78A2IDD5 438 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 POTEJP0CG39 1038 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 ATP5DP30049 168 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 NUMBP49757 651 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 POLGP54098 1239 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-202ENST00000375597 BMPR2Q13873 1038 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 BAATQ14032 418 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-202ENST00000375597 PLCB4Q15147 1175 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 LIN9Q5TKA1 542 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 ACAD10Q6JQN1 1059 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 FMNL3Q8IVF7 1028 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 ANKRD35Q8N283 1001 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 ATL2Q8NHH9 583 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 MECRQ9BV79 373 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 TRAIPQ9BWF2 469 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 DLGAP2Q9P1A6 1054 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 SLC17A7Q9P2U7 560 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 AFF2P51816 1311 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 LAMB1P07942 1786 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 C5orf60A6NFR6 353 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 BTNL10A8MVZ5 291 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 CDH16O75309 829 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 TAC1P20366 129 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 TKFCQ3LXA3 575 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 PDE4DIPQ5VU43 2346 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 C1orf228Q6PIY5 440 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
MCF2L-202ENST00000375597 FAM71DQ8N9W8 422 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-202ENST00000375597 OLIG1Q8TAK6 271 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 CLPTM1LQ96KA5 538 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 FAM111AQ96PZ2 611 aa12.47□□□□□ -0.41
MCF2L-202ENST00000375597 TXNDC9O14530 226 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 TBX3O15119 743 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 ENO1P06733 434 aaKnown RBP12.46□□□□□ -0.41
MCF2L-202ENST00000375597 GTF2H1P32780 548 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 IGBP1P78318 339 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 BIRC2Q13490 618 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 PPP2R5EQ16537 467 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 ARMC3Q5W041 872 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 ZCCHC23Q6ZST2 131 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 C3orf62Q6ZUJ4 267 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 RFWD2Q8NHY2 731 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 PPP1R14CQ8TAE6 165 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 PCYOX1Q9UHG3 505 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 SLC12A4Q9UP95 1085 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 MEI4A8MW99 385 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 CES2O00748 559 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 TOP3BO95985 862 aaKnown RBP12.46□□□□□ -0.41
MCF2L-202ENST00000375597 SPARCL1Q14515 664 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 CGB2Q6NT52 195 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 DNAJC24Q6P3W2 148 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 CASC4Q6P4E1 433 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 RFX6Q8HWS3 928 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 FAM71AQ8IYT1 594 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 MCOLN2Q8IZK6 566 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 PPM1NQ8N819 430 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 CFAP61Q8NHU2 1237 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 TBC1D10AQ9BXI6 508 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
MCF2L-202ENST00000375597 ATP6V0A4Q9HBG4 840 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 CYP4F11Q9HBI6 524 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 KIAA1586Q9HCI6 787 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 GPATCH2LQ9NWQ4 482 aa12.46□□□□□ -0.41
MCF2L-202ENST00000375597 GTPBP10A4D1E9 387 aaKnown RBP12.46□□□□□ -0.42
MCF2L-202ENST00000375597 H0YIN7 160 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 APBA3O96018 575 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 GJB1P08034 283 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 ITIH4Q14624 930 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 RCN1Q15293 331 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 VPS72Q15906 364 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 ANKRD22Q5VYY1 191 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 HACE1Q8IYU2 909 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 OR5B17Q8NGF7 314 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 CKAP2Q8WWK9 683 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.46□□□□□ -0.421e-6■■■■■ 56.2
MCF2L-202ENST00000375597 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.46□□□□□ -0.424e-7■■■■□ 22.3
MCF2L-202ENST00000375597 HEY2Q9UBP5 337 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 GRID1Q9ULK0 1009 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 CHKBQ9Y259 395 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 MROH7Q68CQ1 1323 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 ADGRA3Q8IWK6 1321 aa12.46□□□□□ -0.42
MCF2L-202ENST00000375597 KRT36O76013 467 aa12.45□□□□□ -0.42
MCF2L-202ENST00000375597 CCNE2O96020 404 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms