RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 CITO14578 2027 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 SLC38A8A6NNN8 435 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 XPOTO43592 962 aaKnown RBP15.41■□□□□ 0.06
PTCH1-202ENST00000375271 HIP1RO75146 1068 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 FGF19O95750 216 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 IGFBP6P24592 240 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-202ENST00000375271 CCR2P41597 374 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 NPTX2P47972 431 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 DMWDQ09019 674 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 FZD5Q13467 585 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 NOLC1Q14978 699 aaKnown RBP eCLIP15.41■□□□□ 0.06
PTCH1-202ENST00000375271 CSRP2Q16527 193 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 DGKKQ5KSL6 1271 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 KRT79Q5XKE5 535 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 CD300LGQ6UXG3 332 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 DSTYKQ6XUX3 929 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 LONP2Q86WA8 852 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 FAM184AQ8NB25 1140 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 C18orf25Q96B23 403 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-202ENST00000375271 BICD1Q96G01 975 aa15.41■□□□□ 0.06
PTCH1-202ENST00000375271 A0A1W2PRU2 124 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 CHADO15335 359 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 LARGE1O95461 756 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTCH1-202ENST00000375271 NEK4P51957 841 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 MLLT6P55198 1093 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-202ENST00000375271 PTGDRQ13258 359 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 PTPAQ15257 358 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 ZRSR1Q15695 479 aaKnown RBP15.4■□□□□ 0.06
PTCH1-202ENST00000375271 TAF12Q16514 161 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 XKR4Q5GH76 650 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 RNF19BQ6ZMZ0 732 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 ZSWIM3Q96MP5 696 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 ZMAT2Q96NC0 199 aaKnown RBP15.4■□□□□ 0.06
PTCH1-202ENST00000375271 PGLYRP2Q96PD5 576 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 FOXP1Q9H334 677 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-202ENST00000375271 C17orf75Q9HAS0 396 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 TRPV4Q9HBA0 871 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 CEP72Q9P209 647 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 SPTBN2O15020 2390 aa15.4■□□□□ 0.06
PTCH1-202ENST00000375271 TPRP12270 2363 aaKnown RBP15.4■□□□□ 0.06
PTCH1-202ENST00000375271 RALGAPA1Q6GYQ0 2036 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 OR6C75A6NL08 312 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 SLC16A4O15374 487 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 TOM1L1O75674 476 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 CHRNB1P11230 501 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 TDGF1P13385 188 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 TRAPPC10P48553 1259 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 PPP2R3AQ06190 1150 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 MRPL58Q14197 206 aaKnown RBP15.39■□□□□ 0.05
PTCH1-202ENST00000375271 VEPH1Q14D04 833 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 ARHGAP29Q52LW3 1261 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 ARMCX5Q6P1M9 558 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 ALKAL1Q6UXT8 129 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 ITIH5Q86UX2 942 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 RALGPS2Q86X27 583 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-202ENST00000375271 KIF12Q96FN5 646 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 TIPINQ9BVW5 301 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 ATXN3LQ9H3M9 355 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 THG1LQ9NWX6 298 aaKnown RBP15.39■□□□□ 0.05
PTCH1-202ENST00000375271 PDCD11Q14690 1871 aaKnown RBP15.39■□□□□ 0.05
PTCH1-202ENST00000375271 F5P12259 2224 aa15.39■□□□□ 0.05
PTCH1-202ENST00000375271 SPECC1L-ADORA2AF8WAN1 911 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 CLDN3O15551 220 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 TGM1P22735 817 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 EPHA5P54756 1037 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 TTC8Q8TAM2 541 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 SHKBP1Q8TBC3 707 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 RBM12Q9NTZ6 932 aaKnown RBP15.38■□□□□ 0.05
PTCH1-202ENST00000375271 ARHGAP28Q9P2N2 729 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 TUBGCP4Q9UGJ1 667 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 ASB3Q9Y575 518 aa15.38■□□□□ 0.05
PTCH1-202ENST00000375271 E9PMD0 336 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 H0YCG3 227 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 CCDC192P0DO97 292 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 CTHP32929 405 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 SOX9P48436 509 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 PLCB2Q00722 1185 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 DUSP4Q13115 394 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 SRSF5Q13243 272 aaKnown RBP15.37■□□□□ 0.05
PTCH1-202ENST00000375271 PDIA5Q14554 519 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 PON2Q15165 354 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 GPR158Q5T848 1215 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 ARID3BQ8IVW6 561 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-202ENST00000375271 ZNF687Q8N1G0 1237 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 CDK5RAP3Q96JB5 506 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 PTPRHQ9HD43 1115 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 ANGPTL2Q9UKU9 493 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 UBQLN1Q9UMX0 589 aaKnown RBP15.37■□□□□ 0.05
PTCH1-202ENST00000375271 TIMM13Q9Y5L4 95 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-202ENST00000375271 EPG5Q9HCE0 2579 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 ACACBO00763 2458 aa15.37■□□□□ 0.05
PTCH1-202ENST00000375271 SHISA7A6NL88 538 aa15.36■□□□□ 0.05
PTCH1-202ENST00000375271 HRO43593 1189 aa15.36■□□□□ 0.05
PTCH1-202ENST00000375271 MOSPD3O75425 235 aa15.36■□□□□ 0.05
PTCH1-202ENST00000375271 CLTAP09496 248 aa15.36■□□□□ 0.05
PTCH1-202ENST00000375271 OR4Q2P0C623 313 aa15.36■□□□□ 0.05
PTCH1-202ENST00000375271 CXCL8P10145 99 aa15.36■□□□□ 0.05
PTCH1-202ENST00000375271 ODC1P11926 461 aa15.36■□□□□ 0.05
PTCH1-202ENST00000375271 GABRR2P28476 465 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms