RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TRPS1Q9UHF7 1281 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 BAG5Q9UL15 447 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 R3HDM2Q9Y2K5 976 aaKnown RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 CAPN7Q9Y6W3 813 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 EBAG9O00559 213 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 GPR39O43194 453 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 NCK2O43639 380 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 ZC3H11AO75152 810 aaKnown RBP eCLIP9.59□□□□□ -0.87
UBR4-201ENST00000375218 NEK4P51957 841 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 CSTF3Q12996 717 aaKnown RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 EFTUD2Q15029 972 aaKnown RBP eCLIP9.59□□□□□ -0.871e-7■■□□□ 11.9
UBR4-201ENST00000375218 OLFML2BQ68BL8 750 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 JMJD6Q6NYC1 403 aaPredicted RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 KRT27Q7Z3Y8 459 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 NEK11Q8NG66 645 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 CDKL2Q92772 493 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 EAF2Q96CJ1 260 aaPredicted RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 CORO2BQ9UQ03 480 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 STK38LQ9Y2H1 464 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 ZBTB1Q9Y2K1 713 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 DDX39AO00148 427 aaKnown RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 DDX3XO00571 662 aaKnown RBP eCLIP9.59□□□□□ -0.87
UBR4-201ENST00000375218 OR5F1O95221 314 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 ADAMTS2O95450 1211 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 LONP1P36776 959 aaKnown RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 NOP14P78316 857 aaKnown RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 FAM26DQ5JW98 314 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 ARHGAP22Q7Z5H3 698 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 CEP76Q8TAP6 659 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 ADAD1Q96M93 576 aaKnown RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 MYO15AQ9UKN7 3530 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 GOLGA8SH3BPF8 625 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 SNAP23O00161 211 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 APOL1O14791 398 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 FZD6O60353 706 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 GCFC2P16383 781 aaKnown RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 RHCEP18577 417 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 OTUD4Q01804 1114 aaKnown RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 RHDQ02161 417 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 CCDC102BQ68D86 513 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 ADALQ6DHV7 355 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 THAP5Q7Z6K1 395 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 NLRP8Q86W28 1048 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 CCDC25Q86WR0 208 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 LIX1LQ8IVB5 337 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 OR56B2PQ8NGI1 322 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 OR6P1Q8NGX9 317 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 METTL21AQ8WXB1 218 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 GBP3Q9H0R5 595 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 NMRK1Q9NWW6 199 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 C19orf53Q9UNZ5 99 aaPredicted RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 UNC80Q8N2C7 3258 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 SNED1Q8TER0 1413 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 KIF13BQ9NQT8 1826 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 LRRIQ4A6NIV6 560 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 ERVV-2B6SEH9 535 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 H7C1W4 665 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 PTCD1O75127 700 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 CDK4P11802 303 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 TAGLN2P37802 199 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 CCNFP41002 786 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 PMS2P54278 862 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 NR1H2P55055 460 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 LIPEQ05469 1076 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 ZNF460Q14592 562 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 IFIT1BQ5T764 474 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 TTC22Q5TAA0 569 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 CABP7Q86V35 215 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 GOLM1Q8NBJ4 401 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 CTCFLQ8NI51 663 aaPredicted RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 PI4K2AQ9BTU6 479 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 ISCA1Q9BUE6 129 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 GCOM2Q9BZD3 368 aaPredicted RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 OSBPL7Q9BZF2 842 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 FETUBQ9UGM5 382 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 AFF4Q9UHB7 1163 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 DSEQ9UL01 958 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 SRPK3Q9UPE1 567 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 COL4A5P29400 1685 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 C6P13671 934 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 HAND2P61296 217 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 ARL13BQ3SXY8 428 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 TPGS2Q68CL5 300 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 TOM1L2Q6ZVM7 507 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 SYCP3Q8IZU3 236 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 KIF18AQ8NI77 898 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 EFHD2Q96C19 240 aaPredicted RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 CFAP57Q96MR6 1250 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 TDRD1Q9BXT4 1180 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 PUS3Q9BZE2 481 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 ATP13A3Q9H7F0 1226 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 ACTR10Q9NZ32 417 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 BAZ2AQ9UIF9 1905 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 A0A1B0GUA9 196 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 A6NHS1 94 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 SMIM22K7EJ46 135 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 SLC25A17O43808 307 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 AOC2O75106 756 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 GRIK1P39086 918 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 C19orf57Q0VDD7 668 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms