RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 CEP55Q53EZ4 464 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 TBC1D16Q8TBP0 767 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 GBA2Q9HCG7 927 aaPredicted RBP15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 KDM6BO15054 1643 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 SLC16A1P53985 500 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 NME5P56597 212 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 IRAK1BP1Q5VVH5 260 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 CELF4Q9BZC1 486 aaKnown RBP15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 TRIM45Q9H8W5 580 aaPredicted RBP15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 ADGRG1Q9Y653 693 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 ASB14A6NK59 587 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 C10orf120Q5SQS8 335 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 TADA2BQ86TJ2 420 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 FLT1P17948 1338 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 CDC42BPGQ6DT37 1551 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 CPA2P48052 419 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 SH3BGRP55822 239 aaPredicted RBP15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 ARHGEF7Q14155 803 aa15.43■□□□□ 0.06
NOTCH4-201ENST00000375023 PVALEFA0A1B0GWK0 134 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 ZNF197O14709 1029 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 PGM1P36871 562 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 DEUP1Q05D60 604 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 SNRNP35Q16560 246 aaKnown RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 PNKPQ96T60 521 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 RNF208Q9H0X6 261 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 SELENONQ9NZV5 590 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 ZNF711Q9Y462 761 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 C3orf70A6NLC5 250 aaPredicted RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 HIST1H2AGP0C0S8 130 aaPredicted RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 ITGA4P13612 1032 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 HIST1H2ADP20671 130 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 EPHX2P34913 555 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 PRKCEQ02156 737 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 CLEC4FQ8N1N0 589 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 RBBP8NLQ8NC74 664 aaPredicted RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 HIST1H2AHQ96KK5 128 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 HIST1H2AJQ99878 128 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 H2AFJQ9BTM1 129 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 STK36Q9NRP7 1315 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 MYBL1P10243 752 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 NCAM1P13591 858 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 TAL1P17542 331 aaPredicted RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 KCNJ1P48048 391 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 TRIM60Q495X7 471 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 ARHGAP15Q53QZ3 475 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 METTL16Q86W50 562 aaKnown RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 RIN2Q8WYP3 895 aaPredicted RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 ZC4H2Q9NQZ6 224 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 DAGLAQ9Y4D2 1042 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 NDUFB10O96000 172 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 COG2Q14746 738 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 EMC2Q15006 297 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 PTRHD1Q6GMV3 140 aaKnown RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 ASAP3Q8TDY4 903 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 DDX28Q9NUL7 540 aaKnown RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 SYNMO15061 1565 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 KDM5CP41229 1560 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 MAN1A2O60476 641 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 EYA4O95677 639 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 SLC44A2Q8IWA5 706 aaPredicted RBP15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 RFFLQ8WZ73 363 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 MTBPQ96DY7 904 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 NAGPAQ9UK23 515 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 PCDHB9Q9Y5E1 797 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 FHOD1Q9Y613 1164 aa15.42■□□□□ 0.06
NOTCH4-201ENST00000375023 PHF20L1A8MW92 1017 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 IMPDH2P12268 514 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 GTF2H1P32780 548 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 LVRNQ6Q4G3 990 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 RAB42Q8N4Z0 105 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 SPATA31A3Q5VYP0 1347 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 UBXN8O00124 270 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 CHN1P15882 459 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 ANGPT1Q15389 498 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 SARM1Q6SZW1 724 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 LONP2Q86WA8 852 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 ZKSCAN4Q969J2 545 aaPredicted RBP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 FAM162AQ96A26 154 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 ZMAT2Q96NC0 199 aaKnown RBP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 BRD8Q9H0E9 1235 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 ZC3H7BQ9UGR2 993 aaKnown RBP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 LSM7Q9UK45 103 aaKnown RBP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 ZC3H11AO75152 810 aaKnown RBP eCLIP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 CCDC159P0C7I6 412 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 CHRM3P20309 590 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 CAV1Q03135 178 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 NSUN4Q96CB9 384 aaKnown RBP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 EPHA7Q15375 998 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 SPATA18Q8TC71 538 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 UNKQ9C0B0 810 aaKnown RBP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 SLC9A1P19634 815 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 ATP2C1P98194 919 aaPredicted RBP15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 SHCBP1Q8NEM2 672 aa15.41■□□□□ 0.06
NOTCH4-201ENST00000375023 CPB2Q96IY4 423 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms