RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 GTF2H1P32780 548 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 IRS1P35568 1242 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 CREMQ03060 361 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 NCOA4Q13772 614 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 ADGRE1Q14246 886 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 ZSCAN23Q3MJ62 389 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 KRT39Q6A163 491 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 EP400NLQ6ZTU2 488 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 C11orf57Q6ZUT1 292 aaPredicted RBP16.4■□□□□ 0.22
PFDN6-202ENST00000374607 PLEKHO2Q8TD55 490 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 AUTS2Q8WXX7 1259 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 ZNF516Q92618 1163 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 SUSD3Q96L08 255 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 CNOT6LQ96LI5 555 aaKnown RBP16.4■□□□□ 0.22
PFDN6-202ENST00000374607 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
PFDN6-202ENST00000374607 THAP9Q9H5L6 903 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 TMEM8AQ9HCN3 771 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 DSEQ9UL01 958 aa16.4■□□□□ 0.22
PFDN6-202ENST00000374607 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.4■□□□□ 0.22
PFDN6-202ENST00000374607 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 BECN2A8MW95 431 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 H7C4K7 107 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 PES1O00541 588 aaKnown RBP16.39■□□□□ 0.21
PFDN6-202ENST00000374607 SYN3O14994 580 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 CDK11BP21127 795 aaKnown RBP16.39■□□□□ 0.21
PFDN6-202ENST00000374607 KLRC2P26717 231 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 TKTP29401 623 aaKnown RBP16.39■□□□□ 0.21
PFDN6-202ENST00000374607 ATICP31939 592 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 MXI1P50539 228 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 TNNC1P63316 161 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 CLDN10P78369 228 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 DSG1Q02413 1049 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 ZNF699Q32M78 642 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 HSP90AA4PQ58FG1 418 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 TDRD10Q5VZ19 366 aaKnown RBP16.39■□□□□ 0.21
PFDN6-202ENST00000374607 ANKS3Q6ZW76 656 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 SV2AQ7L0J3 742 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 MRPL43Q8N983 215 aaKnown RBP16.39■□□□□ 0.21
PFDN6-202ENST00000374607 ANKRD20A12PQ8NF67 263 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 ENOX1Q8TC92 643 aaKnown RBP16.39■□□□□ 0.21
PFDN6-202ENST00000374607 SENP8Q96LD8 212 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 MMS19Q96T76 1030 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 VN1R3Q9BXE9 311 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.39■□□□□ 0.212e-7■■■■■ 40.2
PFDN6-202ENST00000374607 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 NFE2L3Q9Y4A8 694 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 PCDHGC5Q9Y5F6 944 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 SNX9Q9Y5X1 595 aa16.39■□□□□ 0.21
PFDN6-202ENST00000374607 C2orf71A6NGG8 1288 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 SMTNL1A8MU46 457 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 FSCN2O14926 492 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 N4BP1O75113 896 aaKnown RBP16.38■□□□□ 0.21
PFDN6-202ENST00000374607 CST3P01034 146 aaPredicted RBP16.38■□□□□ 0.21
PFDN6-202ENST00000374607 C4BPAP04003 597 aaKnown RBP16.38■□□□□ 0.21
PFDN6-202ENST00000374607 P4HA1P13674 534 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 IGFBP6P24592 240 aaPredicted RBP16.38■□□□□ 0.21
PFDN6-202ENST00000374607 NRIP1P48552 1158 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 MYL5Q02045 173 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 YWHAHQ04917 246 aaPredicted RBP16.38■□□□□ 0.21
PFDN6-202ENST00000374607 CAMK1Q14012 370 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 PSMD5Q16401 504 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 SGSM1Q2NKQ1 1148 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 WDR72Q3MJ13 1102 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 TCEAL5Q5H9L2 206 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 WDR44Q5JSH3 913 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 PRSS55Q6UWB4 352 aaPredicted RBP16.38■□□□□ 0.21
PFDN6-202ENST00000374607 GLYCTKQ8IVS8 523 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 THEM5Q8N1Q8 247 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 NXF1Q9UBU9 619 aaKnown RBP16.38■□□□□ 0.21
PFDN6-202ENST00000374607 SIX4Q9UIU6 781 aa16.38■□□□□ 0.21
PFDN6-202ENST00000374607 TIMM13Q9Y5L4 95 aaPredicted RBP16.38■□□□□ 0.21
PFDN6-202ENST00000374607 FSD2A1L4K1 749 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 HIDE1A8MVS5 230 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 M0QZQ0 153 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 PER2O15055 1255 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 ADH1AP07327 375 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 SRGAP2BP0DMP2 458 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 PRKCSHP14314 528 aaPredicted RBP16.37■□□□□ 0.21
PFDN6-202ENST00000374607 POU3F3P20264 500 aaPredicted RBP16.37■□□□□ 0.21
PFDN6-202ENST00000374607 FGFR3P22607 806 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 ZNF165P49910 485 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 MYL6P60660 151 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 TPM4P67936 248 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 PPP3CAQ08209 521 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 ZACNQ401N2 412 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 CTXN3Q4LDR2 81 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 ZNF667Q5HYK9 610 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 RTP2Q5QGT7 225 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 VARS2Q5ST30 1063 aaKnown RBP16.37■□□□□ 0.21
PFDN6-202ENST00000374607 ZNF280DQ6N043 979 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 CD300LGQ6UXG3 332 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 AOPEPQ8N6M6 819 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 BORCS6Q96GS4 357 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 CDCA3Q99618 268 aaPredicted RBP16.37■□□□□ 0.21
PFDN6-202ENST00000374607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.211e-20■■■■■ 215.3
PFDN6-202ENST00000374607 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
PFDN6-202ENST00000374607 KCNJ18B7U540 433 aa16.36■□□□□ 0.21
PFDN6-202ENST00000374607 SPTLC1O15269 473 aa16.36■□□□□ 0.21
PFDN6-202ENST00000374607 HLA-DRAP01903 254 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms