RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ECEL1O95672 775 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 TNNC2P02585 160 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 NFICP08651 508 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 ADORA2AP29274 412 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 GPC3P51654 580 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 NCKAP1LP55160 1127 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 ADCY2Q08462 1091 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 B3GNT9Q6UX72 402 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 FAM71AQ8IYT1 594 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 LRRC45Q96CN5 670 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 OSMRQ99650 979 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 CXCL16Q9H2A7 254 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 HMGXB4Q9UGU5 601 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 GTF3C4Q9UKN8 822 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 SNX9Q9Y5X1 595 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 KIAA0754O94854 1291 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 TUBB4BP68371 445 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 ZNF200P98182 395 aaPredicted RBP11.47□□□□□ -0.57
CXCL12-203ENST00000374429 TMEM121Q9BTD3 319 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 MRPL4Q9BYD3 311 aaKnown RBP11.47□□□□□ -0.57
CXCL12-203ENST00000374429 MTRF1LQ9UGC7 380 aaKnown RBP11.47□□□□□ -0.57
CXCL12-203ENST00000374429 M0QYV0 167 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 DDX3YO15523 660 aaKnown RBP11.47□□□□□ -0.57
CXCL12-203ENST00000374429 SPAG7O75391 227 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 VNN1O95497 513 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 CREB1P16220 341 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 PSMA2P25787 234 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 POLR2BP30876 1174 aaKnown RBP11.47□□□□□ -0.57
CXCL12-203ENST00000374429 PSMC1P62191 440 aaKnown RBP11.47□□□□□ -0.57
CXCL12-203ENST00000374429 DUOXA2Q1HG44 320 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 AP1ARQ63HQ0 302 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 ACAD10Q6JQN1 1059 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 FAM149B1Q96BN6 582 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 ERP44Q9BS26 406 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 RAB17Q9H0T7 212 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 SMYD3Q9H7B4 428 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 GOLGA2P5Q9HBQ8 144 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.47□□□□□ -0.57
CXCL12-203ENST00000374429 TTLL3Q9Y4R7 772 aa11.47□□□□□ -0.57
CXCL12-203ENST00000374429 POLR2AP24928 1970 aaKnown RBP11.47□□□□□ -0.57
CXCL12-203ENST00000374429 PDHXO00330 501 aa11.46□□□□□ -0.57
CXCL12-203ENST00000374429 ADORA2BP29275 332 aa11.46□□□□□ -0.57
CXCL12-203ENST00000374429 GSCP56915 257 aaPredicted RBP11.46□□□□□ -0.57
CXCL12-203ENST00000374429 TAF5Q15542 800 aa11.46□□□□□ -0.57
CXCL12-203ENST00000374429 PIAS4Q8N2W9 510 aaPredicted RBP11.46□□□□□ -0.57
CXCL12-203ENST00000374429 OR6B3Q8NGW1 331 aa11.46□□□□□ -0.57
CXCL12-203ENST00000374429 SHC3Q92529 594 aa11.46□□□□□ -0.57
CXCL12-203ENST00000374429 NDRG1Q92597 394 aaKnown RBP11.46□□□□□ -0.57
CXCL12-203ENST00000374429 NOCTQ9UK39 431 aaKnown RBP11.46□□□□□ -0.57
CXCL12-203ENST00000374429 PCDHB2Q9Y5E7 798 aa11.46□□□□□ -0.57
CXCL12-203ENST00000374429 TIMM13Q9Y5L4 95 aaPredicted RBP11.46□□□□□ -0.57
CXCL12-203ENST00000374429 RPTORQ8N122 1335 aa11.46□□□□□ -0.57
CXCL12-203ENST00000374429 GTPBP10A4D1E9 387 aaKnown RBP11.46□□□□□ -0.58
CXCL12-203ENST00000374429 ERFP50548 548 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 PMS2P54278 862 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 CCDC142Q17RM4 750 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 RAB6CQ53S08 254 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 SH3PXD2AQ5TCZ1 1133 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 C1orf228Q6PIY5 440 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 ARMCX2Q7L311 632 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 CATSPER4Q7RTX7 472 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 ERO1BQ86YB8 467 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 SLC13A5Q86YT5 568 aaPredicted RBP11.46□□□□□ -0.58
CXCL12-203ENST00000374429 KIF12Q96FN5 646 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 HES6Q96HZ4 224 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 RAB6CQ9H0N0 254 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 MYPNQ86TC9 1320 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 GOLGA6L7A0A1B0GV03 622 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 CELF2O95319 508 aaKnown RBP11.46□□□□□ -0.58
CXCL12-203ENST00000374429 PRLRP16471 622 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 ZNF667Q5HYK9 610 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 FAM47EQ6ZV65 393 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 ARMC9Q7Z3E5 817 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 SRRM1Q8IYB3 904 aaKnown RBP11.46□□□□□ -0.58
CXCL12-203ENST00000374429 MCOLN2Q8IZK6 566 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 GLIS1Q8NBF1 620 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 TFAP2BQ92481 460 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 NAP1L3Q99457 506 aaPredicted RBP11.46□□□□□ -0.58
CXCL12-203ENST00000374429 JPH2Q9BR39 696 aaPredicted RBP11.46□□□□□ -0.58
CXCL12-203ENST00000374429 ISCUQ9H1K1 167 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 ANAPC5Q9UJX4 755 aa11.46□□□□□ -0.58
CXCL12-203ENST00000374429 C10orf71Q711Q0 1435 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 MAST2Q6P0Q8 1798 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 CCDC78A2IDD5 438 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 IQCF3P0C7M6 154 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 OSBPP22059 807 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 CHKAP35790 457 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 BASP1P80723 227 aaKnown RBP11.45□□□□□ -0.58
CXCL12-203ENST00000374429 TTLL4Q14679 1199 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 KIF22Q14807 665 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 METTL7BQ6UX53 244 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 CRELD2Q6UXH1 353 aaPredicted RBP11.45□□□□□ -0.58
CXCL12-203ENST00000374429 REPS2Q8NFH8 660 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 ANKRD36BP1Q96IX9 119 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 CEP41Q9BYV8 373 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 E2F8A0AVK6 867 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 ADCY3O60266 1144 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 STAM2O75886 525 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 RARBP10826 455 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 ATF2P15336 505 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms