RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 C3orf58Q8NDZ4 430 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 TMC2Q8TDI7 906 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 PARD3BQ8TEW8 1205 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 CEP63Q96MT8 703 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 KLHL5Q96PQ7 755 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 UHRF1Q96T88 793 aaPredicted RBP19.8■□□□□ 0.76
PBX3-205ENST00000373492 MTMR12Q9C0I1 747 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 RXFP1Q9HBX9 757 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.8■□□□□ 0.76
PBX3-205ENST00000373492 RWDD2AQ9UIY3 292 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 ITGA11Q9UKX5 1188 aa19.8■□□□□ 0.76
PBX3-205ENST00000373492 CUL9Q8IWT3 2517 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 SLC16A3O15427 465 aaKnown RBP19.79■□□□□ 0.76
PBX3-205ENST00000373492 FGFR1OPO95684 399 aaKnown RBP19.79■□□□□ 0.76
PBX3-205ENST00000373492 ITGB3P05106 788 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 KRT19P08727 400 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 CNPP09543 421 aaKnown RBP19.79■□□□□ 0.76
PBX3-205ENST00000373492 HOXB8P17481 243 aaPredicted RBP19.79■□□□□ 0.76
PBX3-205ENST00000373492 PAX3P23760 479 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 AP3M2P53677 418 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 RBM10P98175 930 aaKnown RBP19.79■□□□□ 0.76
PBX3-205ENST00000373492 CREMQ03060 361 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 DPCR1Q3MIW9 517 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 CT47A1Q5JQC4 288 aaPredicted RBP19.79■□□□□ 0.76
PBX3-205ENST00000373492 TTI2Q6NXR4 508 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 ANKRD54Q6NXT1 300 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 LLGL2Q6P1M3 1020 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 ZC3H3Q8IXZ2 948 aaKnown RBP19.79■□□□□ 0.76
PBX3-205ENST00000373492 CSGALNACT2Q8N6G5 542 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 EEF2KMTQ96G04 330 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 ZNF560Q96MR9 790 aa19.79■□□□□ 0.76
PBX3-205ENST00000373492 ANO9A1A5B4 782 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 PIRO00625 290 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 C2CD2LO14523 706 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 MBTPS2O43462 519 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 LETM1O95202 739 aaPredicted RBP19.78■□□□□ 0.76
PBX3-205ENST00000373492 C1RP00736 705 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 IL9P15248 144 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 KLRC2P26717 231 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 PNPLA4P41247 253 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 VAMP7P51809 220 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 ENPEPQ07075 957 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 BFSP1Q12934 665 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 SMAD2Q15796 467 aaKnown RBP19.78■□□□□ 0.76
PBX3-205ENST00000373492 CLUL1Q15846 466 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 TPD52L1Q16890 204 aaPredicted RBP19.78■□□□□ 0.76
PBX3-205ENST00000373492 FAM171A1Q5VUB5 890 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 FILIP1Q7Z7B0 1213 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 C1orf127Q8N9H9 656 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 OR5B17Q8NGF7 314 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 SLC22A17Q8WUG5 538 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 POP1Q99575 1024 aaKnown RBP19.78■□□□□ 0.76
PBX3-205ENST00000373492 DUSP9Q99956 384 aaKnown RBP19.78■□□□□ 0.76
PBX3-205ENST00000373492 TTPALQ9BTX7 342 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 DZANK1Q9NVP4 752 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 FNIP2Q9P278 1114 aa19.78■□□□□ 0.76
PBX3-205ENST00000373492 PTPRJQ12913 1337 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 ARHGEF37A1IGU5 675 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 LRRIQ3A6PVS8 624 aaPredicted RBP19.77■□□□□ 0.76
PBX3-205ENST00000373492 IKBKBO14920 756 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 ADH1AP07327 375 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 ERCC5P28715 1186 aaPredicted RBP19.77■□□□□ 0.76
PBX3-205ENST00000373492 POLR2BP30876 1174 aaKnown RBP19.77■□□□□ 0.76
PBX3-205ENST00000373492 BRCC3P46736 316 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 TAF6P49848 677 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 CLCN4P51793 760 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 RBP5P82980 135 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 STX1AQ16623 288 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 SV2CQ496J9 727 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 PDXDC1Q6P996 788 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 CD300LGQ6UXG3 332 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 DSTYKQ6XUX3 929 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.77■□□□□ 0.76
PBX3-205ENST00000373492 CEP57Q86XR8 500 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 TMEM130Q8N3G9 435 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 RIN2Q8WYP3 895 aaPredicted RBP19.77■□□□□ 0.76
PBX3-205ENST00000373492 ANO10Q9NW15 660 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 AGAP1Q9UPQ3 857 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 NCOR1O75376 2440 aa19.77■□□□□ 0.76
PBX3-205ENST00000373492 TEX28O15482 410 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 PHACTR2O75167 634 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 GNA14O95837 355 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 LILRA4P59901 499 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 CLDN10P78369 228 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 BIRC3Q13489 604 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 CCDC40Q4G0X9 1142 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 RTP2Q5QGT7 225 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 SYCE2Q6PIF2 218 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 TRAPPC11Q7Z392 1133 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 LRRC52Q8N7C0 313 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 PLEKHO2Q8TD55 490 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 SUSD3Q96L08 255 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 B3GALT6Q96L58 329 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 SRRTQ9BXP5 876 aaKnown RBP19.76■□□□□ 0.75
PBX3-205ENST00000373492 S1PR5Q9H228 398 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 METTL14Q9HCE5 456 aaKnown RBP19.76■□□□□ 0.75
PBX3-205ENST00000373492 PRKAG3Q9UGI9 489 aa19.76■□□□□ 0.75
PBX3-205ENST00000373492 MYH10P35580 1976 aa19.75■□□□□ 0.75
PBX3-205ENST00000373492 TCF20Q9UGU0 1960 aaKnown RBP19.75■□□□□ 0.75
PBX3-205ENST00000373492 I3L4J1 428 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms