RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 DNAJC9Q8WXX5 260 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 TMEM39BQ9GZU3 492 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 UBN1Q9NPG3 1134 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 COL20A1Q9P218 1284 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 A0A1W2PPM1 405 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 LRRD1A4D1F6 860 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 GRIN3BO60391 1043 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 DCTN3O75935 186 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 CD58P19256 250 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 MUM1Q2TAK8 710 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 KHDC1Q4VXA5 237 aaKnown RBP15.69■□□□□ 0.1
COL9A2-202ENST00000372748 PCNX4Q63HM2 1172 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 AP1ARQ63HQ0 302 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 TMEM154Q6P9G4 183 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 DENND1AQ8TEH3 1009 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 SPIRE2Q8WWL2 714 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 INPP5DQ92835 1189 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 TSC22D3Q99576 134 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 MXRA8Q9BRK3 442 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 PI4K2AQ9BTU6 479 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 GPRC5CQ9NQ84 441 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 KCNH7Q9NS40 1196 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 HOMER2Q9NSB8 354 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 HERC5Q9UII4 1024 aaKnown RBP15.69■□□□□ 0.1
COL9A2-202ENST00000372748 ACTL7BQ9Y614 415 aa15.69■□□□□ 0.1
COL9A2-202ENST00000372748 MROH7Q68CQ1 1323 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 SSTR3P32745 418 aaPredicted RBP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 OVGP1Q12889 678 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 SYDE1Q6ZW31 735 aaPredicted RBP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 CCDC89Q8N998 374 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 TAS1R2Q8TE23 839 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 UCMAQ8WVF2 138 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 C10orf82Q8WW14 230 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 DDX1Q92499 740 aaKnown RBP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 DDX27Q96GQ7 796 aaKnown RBP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 SMC6Q96SB8 1091 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 C12orf65Q9H3J6 166 aaKnown RBP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 VPS37BQ9H9H4 285 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 METTL5Q9NRN9 209 aaKnown RBP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 ZFP69BQ9UJL9 534 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 USTQ9Y2C2 406 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 NEU2Q9Y3R4 380 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 NFIBO00712 420 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 GNAT1P11488 350 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 MAN1A1P33908 653 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 PLEKHG4Q58EX7 1191 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 OTOAQ7RTW8 1153 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 CCDC125Q86Z20 511 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 KCTD17Q8N5Z5 321 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 HELQQ8TDG4 1101 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 FHDC1Q9C0D6 1143 aaPredicted RBP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 EHMT1Q9H9B1 1298 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 LARSQ9P2J5 1176 aaKnown RBP15.68■□□□□ 0.1
COL9A2-202ENST00000372748 ZHX2Q9Y6X8 837 aa15.68■□□□□ 0.1
COL9A2-202ENST00000372748 P4HA2O15460 535 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 MAGEB2O15479 319 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 FDX1P10109 184 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 ETS1P14921 441 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 DGKZQ13574 1117 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 PDK4Q16654 411 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 KAZNQ674X7 775 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 SLC30A9Q6PML9 568 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 DSTYKQ6XUX3 929 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 NLRP9Q7RTR0 991 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 MIPEPQ99797 713 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 DLGAP2Q9P1A6 1054 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 ZNF70Q9UC06 446 aaPredicted RBP15.67■□□□□ 0.1
COL9A2-202ENST00000372748 CCPG1Q9ULG6 757 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 SLC16A4O15374 487 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 NEFHP12036 1026 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 RFC5P40937 340 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 MTM1Q13496 603 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 HHATQ5VTY9 493 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 B3GNT9Q6UX72 402 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 VTI1AQ96AJ9 217 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 ANKRD27Q96NW4 1050 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 TMEM206Q9H813 350 aa15.67■□□□□ 0.1
COL9A2-202ENST00000372748 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL9A2-202ENST00000372748 PI4K2BG5E9Z4 385 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 BANF1O75531 89 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 PLS3P13797 630 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 TAS2R40P59535 323 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 KLC1Q07866 573 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 TRAF1Q13077 416 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 KLF1Q13351 362 aaPredicted RBP15.66■□□□□ 0.1
COL9A2-202ENST00000372748 CLEC16AQ2KHT3 1053 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 TSNAXIP1Q2TAA8 658 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 ZFYVE27Q5T4F4 411 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 RNF220Q5VTB9 566 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 ENDOVQ8N8Q3 282 aaKnown RBP15.66■□□□□ 0.1
COL9A2-202ENST00000372748 TEKT4Q8WW24 435 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 CFAP57Q96MR6 1250 aa15.66■□□□□ 0.1
COL9A2-202ENST00000372748 ALG13Q9NP73 1137 aaKnown RBP15.66■□□□□ 0.1
COL9A2-202ENST00000372748 PAPOLBQ9NRJ5 636 aaKnown RBP15.66■□□□□ 0.1
COL9A2-202ENST00000372748 NMRK1Q9NWW6 199 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms