RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 UBASH3AP57075 661 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 SLC8A3P57103 927 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 NTHL1P78549 312 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 ADCY1Q08828 1119 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 TTC31Q49AM3 519 aaPredicted RBP7.53□□□□□ -1.2
USP1-202ENST00000371146 AP1ARQ63HQ0 302 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 OVOS1Q6IE37 1185 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 DNAAF5Q86Y56 855 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 PGBD3Q8N328 593 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 FBXL16Q8N461 479 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 C4orf32Q8N8J7 132 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 TMEM161BQ8NDZ6 487 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 OR5B17Q8NGF7 314 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 CRISPLD2Q9H0B8 497 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 IFT122Q9HBG6 1241 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 PLCB1Q9NQ66 1216 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 IFNKQ9P0W0 207 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 CITO14578 2027 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 DDHD2O94830 711 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 FGFR1OPO95684 399 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 ATP1A3P13637 1013 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 ACO1P21399 889 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 CD72P21854 359 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 SLC11A1P49279 550 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 GYS2P54840 703 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 SLC12A3P55017 1021 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 DLG4P78352 724 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 SPIRE1Q08AE8 756 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 RAB30Q15771 203 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 CDO1Q16878 200 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 NAALADL2Q58DX5 795 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 RTN4RL1Q86UN2 441 aaPredicted RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 DAW1Q8N136 415 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 SLC7A14Q8TBB6 771 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 RSPH1Q8WYR4 309 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 CNOT6LQ96LI5 555 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 TOX2Q96NM4 488 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 MYO1AQ9UBC5 1043 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 HESX1Q9UBX0 185 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 PRR23AA6NEV1 266 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 CLTAP09496 248 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 LCP1P13796 627 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 ALDH1A3P47895 512 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 POLR2FP61218 127 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 FKBP3Q00688 224 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 NCOA4Q13772 614 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 MORC3Q14149 939 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 PDCD2Q16342 344 aaPredicted RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 STX1AQ16623 288 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 TMC6Q7Z403 805 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 ZNF410Q86VK4 478 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 SPATA2LQ8IUW3 424 aaPredicted RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 ELMOD1Q8N336 334 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 APPL2Q8NEU8 664 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 SMG7Q92540 1137 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 P2RX5Q93086 422 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 FAXDC2Q96IV6 333 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 CFHR5Q9BXR6 569 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 NRDE2Q9H7Z3 1164 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 ZDHHC4Q9NPG8 344 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 ZNF446Q9NWS9 450 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 PPME1Q9Y570 386 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 BICDL2A1A5D9 508 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 HIDE1A8MVS5 230 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 M0R2N6 131 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 CLDN5O00501 218 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 ATP2C2O75185 946 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 BDNFP23560 247 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 VAMP7P51809 220 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 CDC42EP1Q00587 391 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 PLD1Q13393 1074 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 NT5DC1Q5TFE4 455 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 LRSAM1Q6UWE0 723 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 AGMOQ6ZNB7 445 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 C11orf57Q6ZUT1 292 aaPredicted RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 CCAR2Q8N163 923 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 CCDC26Q8TAB7 109 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 LRRC15Q8TF66 581 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 SCFD1Q8WVM8 642 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 SENP8Q96LD8 212 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 CDX2Q99626 313 aaPredicted RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 C11orf84Q9BUA3 381 aaPredicted RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 LSM14BQ9BX40 385 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 GPR62Q9BZJ7 368 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 LRRC4Q9HBW1 653 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 AGPAT3Q9NRZ7 376 aa7.52□□□□□ -1.21
USP1-202ENST00000371146 MRPS23Q9Y3D9 190 aaKnown RBP7.52□□□□□ -1.21
USP1-202ENST00000371146 DLEC1Q9Y238 1755 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 NUMA1Q14980 2115 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 MYH7P12883 1935 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 PITPNM1O00562 1244 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 HOXA2O43364 376 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 THAP12O43422 761 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 ZNF18P17022 549 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 ANXA13P27216 316 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 TKTP29401 623 aaKnown RBP7.51□□□□□ -1.21
USP1-202ENST00000371146 MYL7Q01449 175 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 MBTD1Q05BQ5 628 aa7.51□□□□□ -1.21
USP1-202ENST00000371146 PSMD5Q16401 504 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms