RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 HOXD13P35453 343 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 MAGOHP61326 146 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 C1orf228Q6PIY5 440 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 ACOT1Q86TX2 421 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 JAMLQ86YT9 394 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 MMGT1Q8N4V1 131 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 C9orf72Q96LT7 481 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 CGRRF1Q99675 332 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 CARD9Q9H257 536 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 SLITRK6Q9H5Y7 841 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 SAYSD1Q9NPB0 183 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 INTS9Q9NV88 658 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 AJAP1Q9UKB5 411 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 STRIP2Q9ULQ0 834 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 POLIQ9UNA4 740 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 FRMD3A2A2Y4 597 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 GLTPD2A6NH11 291 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 ATP5DP30049 168 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 ZNF131P52739 623 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 LMNB2Q03252 620 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 NME3Q13232 169 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 TMED2Q15363 201 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 HHATQ5VTY9 493 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 MFSD14CQ5VZR4 134 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 EPM2AIP1Q7L775 607 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 CEP57Q86XR8 500 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 SCN4BQ8IWT1 228 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 CCDC33Q8N5R6 958 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 CASKIN2Q8WXE0 1202 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 UPF1Q92900 1129 aaKnown RBP eCLIP7.55□□□□□ -1.26e-7■■■■□ 23.7
TGFBR3-202ENST00000370399 RBM41Q96IZ5 413 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 RUNDC3BQ96NL0 473 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 RNPEPQ9H4A4 650 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 DHX35Q9H5Z1 703 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 SNTG2Q9NY99 539 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 CREB3O43889 395 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 STK10O94804 968 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ACVR2BQ13705 512 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 GRIK4Q16099 956 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 EXOC4Q96A65 974 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ZIM3Q96PE6 472 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ABHD16BQ9H3Z7 469 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 INTUQ9ULD6 942 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 HPCAL4Q9UM19 191 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 DIS3Q9Y2L1 958 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 MYH6P13533 1939 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 BTBD19C9JJ37 291 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ACKR2O00590 384 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 PPFIA4O75335 1185 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ZBED1O96006 694 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 GZMAP12544 262 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 SAT1P21673 171 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 MAN1A1P33908 653 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ARL4AP40617 200 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 PRKCIP41743 596 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 MARCKSL1P49006 195 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 PMS2P54278 862 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 TDRD10Q5VZ19 366 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 SLC9A9Q8IVB4 645 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 FEZF2Q8TBJ5 459 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 KREMEN1Q96MU8 473 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ZSWIM1Q9BR11 485 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 NT5C1AQ9BXI3 368 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 HOMER3Q9NSC5 361 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 DPP3Q9NY33 737 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 RBPJLQ9UBG7 517 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 EXOC1LA0A1B0GW35 172 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 WDR91A4D1P6 747 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 PJA2O43164 708 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 STRNO43815 780 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 GAS2O43903 313 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 RPS6KA5O75582 802 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 LYPLA2O95372 231 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 MYBL2P10244 700 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 PYGMP11217 842 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ADSSP30520 456 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ARSEP51690 589 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 MARSP56192 900 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ZNF484Q5JVG2 852 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 B4GALNT4Q76KP1 1039 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 NT5DC3Q86UY8 548 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 GDAP1Q8TB36 358 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 LENG1Q96BZ8 264 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 THOC1Q96FV9 657 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 METTL5Q9NRN9 209 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ASNSD1Q9NWL6 643 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 COMMD10Q9Y6G5 202 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 LACTBL1A8MY62 500 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 H3BQF6 201 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 MYBL1P10243 752 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 PRLRP16471 622 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 NCKAP1LP55160 1127 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 GUCY1A3Q02108 690 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 SLMAPQ14BN4 828 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 PSMD6Q15008 389 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 SLC13A5Q86YT5 568 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 P3H4Q92791 437 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 ERP44Q9BS26 406 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms