RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 HIST1H2AJQ99878 128 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 H2AFJQ9BTM1 129 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 KLHL25Q9H0H3 589 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 ITSN1Q15811 1721 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 PVALEFA0A1B0GWK0 134 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 CYP26A1O43174 497 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 MTRF1O75570 445 aaKnown RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 FAM107AO95990 144 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 NT5C2P49902 561 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 KYAT1Q16773 422 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 DGKHQ86XP1 1220 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 WNK4Q96J92 1243 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 A0A1W2PQC6 194 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 RGS5O15539 181 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 PTK7Q13308 1070 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 CASP10Q92851 521 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 SMAD5Q99717 465 aaKnown RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 VSNL1P62760 191 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 CSTF3Q12996 717 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 SHCBP1Q8NEM2 672 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 MCEEQ96PE7 176 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 SMARCAD1Q9H4L7 1026 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 TRPC7Q9HCX4 862 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 ZBTB1Q9Y2K1 713 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 FCER1AP12319 257 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 AKT1P31749 480 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 HPCAP84074 193 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 ERP27Q96DN0 273 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 DTNAQ9Y4J8 743 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 YWHABP31946 246 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 PTPN12Q05209 780 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 LRIG3Q6UXM1 1119 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 C18orf8Q96DM3 657 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 VIPAS39Q9H9C1 493 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 DGKIO75912 1065 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 SOAT1P35610 550 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 PIGHQ14442 188 aaPredicted RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 ADCK2Q7Z695 626 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 NARS2Q96I59 477 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 ARHGAP31Q2M1Z3 1444 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 TRIM49P0CI25 452 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 TRIM49CP0CI26 452 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 RALBP11234 206 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 TP53BP2Q13625 1128 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 TRIP10Q15642 601 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 ZNF668Q96K58 619 aaPredicted RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 ATP6V1B1P15313 513 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 USP10Q14694 798 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 NAA30Q147X3 362 aaPredicted RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
HCFC1-202ENST00000369984 ALBP02768 609 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 CPB1P15086 417 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 SLC16A1P53985 500 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 LAMB3Q13751 1172 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 PCSK7Q16549 785 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 TRIM16LQ309B1 348 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 C4orf33Q8N1A6 199 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 KIF2BQ8N4N8 673 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 DNAJC7Q99615 494 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 CDY2AQ9Y6F7 541 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 CDY1Q9Y6F8 540 aa13.03□□□□□ -0.32
HCFC1-202ENST00000369984 UTYO14607 1347 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 CASZ1Q86V15 1759 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 MTF1Q14872 753 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 KRT73Q86Y46 540 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 LIMA1Q9UHB6 759 aaKnown RBP13.02□□□□□ -0.32
HCFC1-202ENST00000369984 TK2O00142 265 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 EIF2S1P05198 315 aaKnown RBP13.02□□□□□ -0.32
HCFC1-202ENST00000369984 GPR101Q96P66 508 aaPredicted RBP13.02□□□□□ -0.32
HCFC1-202ENST00000369984 MMP19Q99542 508 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 COA1Q9GZY4 146 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 LATS2Q9NRM7 1088 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 TNPO2O14787 897 aaKnown RBP13.02□□□□□ -0.32
HCFC1-202ENST00000369984 AP3M2P53677 418 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 TTC33Q6PID6 262 aaPredicted RBP13.02□□□□□ -0.32
HCFC1-202ENST00000369984 KIRREL3Q8IZU9 778 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 NSUN6Q8TEA1 469 aaKnown RBP13.02□□□□□ -0.32
HCFC1-202ENST00000369984 PPP1R14AQ96A00 147 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 FAM129AQ9BZQ8 928 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.32
HCFC1-202ENST00000369984 WDR19Q8NEZ3 1342 aa13.02□□□□□ -0.33
HCFC1-202ENST00000369984 BIRC5O15392 142 aa13.02□□□□□ -0.33
HCFC1-202ENST00000369984 P4HBP07237 508 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms