RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 NCSTNQ92542 709 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 PPP1R13BQ96KQ4 1090 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 FBXL18Q96ME1 805 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 PPM1MQ96MI6 270 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 CMTM3Q96MX0 182 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 OSGEPQ9NPF4 335 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 DACT1Q9NYF0 836 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 MIS18AQ9NYP9 233 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 STIM2Q9P246 746 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 ATAD5Q96QE3 1844 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 TMEM8BA6NDV4 472 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 H0Y626 953 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 MASP2O00187 686 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 GABRDO14764 452 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 ZW10O43264 779 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 RNGTTO60942 597 aaKnown RBP5.4□□□□□ -1.55
UBE3D-202ENST00000369746 SERPINC1P01008 464 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 EIF2S1P05198 315 aaKnown RBP5.4□□□□□ -1.55
UBE3D-202ENST00000369746 CYBAP13498 195 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 S100A1P23297 94 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 IRS1P35568 1242 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 CCT5P48643 541 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 SERPINB8P50452 374 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 MYL6P60660 151 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 UBXN1Q04323 297 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 LRMPQ12912 555 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 IKQ13123 557 aaPredicted RBP5.4□□□□□ -1.55
UBE3D-202ENST00000369746 STIM1Q13586 685 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 NCOA4Q13772 614 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 COL9A2Q14055 689 aaPredicted RBP5.4□□□□□ -1.55
UBE3D-202ENST00000369746 KRT71Q3SY84 523 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 HSP90AA4PQ58FG1 418 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 ADALQ6DHV7 355 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 RETSATQ6NUM9 610 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 WDR93Q6P2C0 686 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 C3orf62Q6ZUJ4 267 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 FAM178BQ8IXR5 827 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 LSMEM2Q8N112 164 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 MB21D1Q8N884 522 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 NOC3LQ8WTT2 800 aaKnown RBP5.4□□□□□ -1.55
UBE3D-202ENST00000369746 IFT81Q8WYA0 676 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 KIF12Q96FN5 646 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 MAELQ96JY0 434 aaKnown RBP5.4□□□□□ -1.55
UBE3D-202ENST00000369746 FERD3LQ96RJ6 166 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 TBCBQ99426 244 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 RASSF1Q9NS23 344 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 NOP53Q9NZM5 478 aaKnown RBP5.4□□□□□ -1.55
UBE3D-202ENST00000369746 HESX1Q9UBX0 185 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 CDC23Q9UJX2 597 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 TBX21Q9UL17 535 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 KIAA1257Q9ULG3 409 aa5.4□□□□□ -1.55
UBE3D-202ENST00000369746 COL4A4P53420 1690 aaPredicted RBP5.4□□□□□ -1.55
UBE3D-202ENST00000369746 FRMD3A2A2Y4 597 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 E7ENQ6 273 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SEPT4O43236 478 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SMIM24O75264 130 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GOSR1O95249 250 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PDHA1P08559 390 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CD97P48960 835 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GRIN2CQ14957 1233 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MTERF2Q49AM1 385 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CFAP157Q5JU67 520 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SPATA1Q5VX52 437 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ISLR2Q6UXK2 745 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 RAB11FIP4Q86YS3 637 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ANKMY2Q8IV38 441 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MAP4K3Q8IVH8 894 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SLC15A3Q8IY34 581 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 AFAP1L2Q8N4X5 818 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GFM2Q969S9 779 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GDAP1L1Q96MZ0 367 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 RMDN3Q96TC7 470 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SH3GL2Q99962 352 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 METTL22Q9BUU2 404 aaPredicted RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 UNKQ9C0B0 810 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC113Q9H0I3 377 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 WNT5BQ9H1J7 359 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 RSAD1Q9HA92 442 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CDHR5Q9HBB8 845 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GALNT8Q9NY28 637 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 AATFQ9NY61 560 aaKnown RBP eCLIP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MYO1AQ9UBC5 1043 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CPA4Q9UI42 421 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GPR34Q9UPC5 381 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 LIMCH1Q9UPQ0 1083 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 EFR3BQ9Y2G0 817 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 Q9Y3F1 56 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PCDHB2Q9Y5E7 798 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PCDHB13Q9Y5F0 798 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SPEF2Q9C093 1822 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ANO9A1A5B4 782 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TMEM247A6NEH6 219 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MYO1FO00160 1098 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 KCNQ3O43525 872 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ACTN4O43707 911 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 DDHD2O94830 711 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ABLIM3O94929 683 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 EPB41P11171 864 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 POLR2EP19388 210 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms