RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZNF280CQ8ND82 737 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ELMO3Q96BJ8 720 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 DHX33Q9H6R0 707 aaKnown RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 TMEM134Q9H6X4 195 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ACAD9Q9H845 621 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 APOBEC3GQ9HC16 384 aaKnown RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 ZNF112Q9UJU3 913 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ZNF214Q9UL59 606 aaPredicted RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 MAFBQ9Y5Q3 323 aaPredicted RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 ARID2Q68CP9 1835 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 K7ERI5 159 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ATG7O95352 703 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 OATP04181 439 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 CALB1P05937 261 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ICAM3P32942 547 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 RFC5P40937 340 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ZNF132P52740 706 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 TAS2R40P59535 323 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 NOP14P78316 857 aaKnown RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 TAP1Q03518 808 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 NFX1Q12986 1120 aaKnown RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 TRIP13Q15645 432 aaPredicted RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 LMBRD2Q68DH5 695 aaPredicted RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 TMEM270Q6UE05 265 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 WNK4Q96J92 1243 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 TTC25Q96NG3 672 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 MSTO1Q9BUK6 570 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 HEMGNQ9BXL5 484 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 TEX13BQ9BXU2 312 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 MTFR1LQ9H019 292 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 PPCSQ9HAB8 311 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 UBN1Q9NPG3 1134 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 NKIRAS1Q9NYS0 192 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ZNFX1Q9P2E3 1918 aaKnown RBP15.15■□□□□ 0.02
CD48-201ENST00000368045 PTPRJQ12913 1337 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 TCP11X1B4DZS4 312 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 C19orf81C9J6K1 198 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 TLR3O15455 904 aaKnown RBP15.15■□□□□ 0.02
CD48-201ENST00000368045 BRAFP15056 766 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 MMP8P22894 467 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 GLRA2P23416 452 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 SLC8A1P32418 973 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 ACOT2P49753 483 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 LLGL1Q15334 1064 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 SPOPLQ6IQ16 392 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 TDRPQ86YL5 185 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 ANKRD35Q8N283 1001 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 UBR7Q8N806 425 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 CCDC63Q8NA47 563 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 ZKSCAN4Q969J2 545 aaPredicted RBP15.15■□□□□ 0.02
CD48-201ENST00000368045 GRAMD1AQ96CP6 724 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 CFAP57Q96MR6 1250 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 NIFKQ9BYG3 293 aaKnown RBP15.15■□□□□ 0.02
CD48-201ENST00000368045 IMPG2Q9BZV3 1241 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 KCNK9Q9NPC2 374 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 ZNF302Q9NR11 478 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 PICK1Q9NRD5 415 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 ARL2BPQ9Y2Y0 163 aa15.15■□□□□ 0.02
CD48-201ENST00000368045 ADGRA2Q96PE1 1338 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 CNTNAP2Q9UHC6 1331 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 LIASO43766 372 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 ATP2C2O75185 946 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 TJP3O95049 919 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 WNT7BP56706 349 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 RIPK1Q13546 671 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
CD48-201ENST00000368045 GSTA5Q7RTV2 222 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 SPATA21Q7Z572 469 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 PHLDB2Q86SQ0 1253 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 SLC7A3Q8WY07 619 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 MAGEB18Q96M61 343 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 ZNF518BQ9C0D4 1074 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 EURLQ9NYK6 297 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 NAALADL1Q9UQQ1 740 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 DRG1Q9Y295 367 aaKnown RBP15.14■□□□□ 0.01
CD48-201ENST00000368045 ZNF541Q9H0D2 1346 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 FER1L6Q2WGJ9 1857 aa15.14■□□□□ 0.01
CD48-201ENST00000368045 TMEM191CA6NGB0 347 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 LRRIQ4A6NIV6 560 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 DNALI1O14645 258 aaPredicted RBP15.13■□□□□ 0.01
CD48-201ENST00000368045 GJB6O95452 261 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 TMEM191BP0C7N4 346 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 PTPRAP18433 802 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 MAGEA4P43358 317 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 ELF3P78545 371 aaPredicted RBP15.13■□□□□ 0.01
CD48-201ENST00000368045 NCOA4Q13772 614 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 TMEM132BQ14DG7 1078 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 GALNTL6Q49A17 601 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 PREPLQ4J6C6 727 aaPredicted RBP15.13■□□□□ 0.01
CD48-201ENST00000368045 LLGL2Q6P1M3 1020 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 ZPBP2Q6X784 338 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 PASD1Q8IV76 773 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 DNERQ8NFT8 737 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 MGARPQ8TDB4 240 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 TMEM143Q96AN5 459 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 FAM84AQ96KN4 292 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 SLITRK1Q96PX8 696 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 CAMKK2Q96RR4 588 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms