RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ALG6Q9Y672 507 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 FAM208AQ9UK61 1670 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 E2F6O75461 281 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 KRT4P19013 534 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 FDFT1P37268 417 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 MTA1Q13330 715 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 APPL2Q8NEU8 664 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 FAM161BQ96MY7 647 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 JMJD4Q9H9V9 463 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 TMCO5AQ8N6Q1 288 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 LMCD1Q9NZU5 365 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 SLC2A3P11169 496 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 CACNB3P54284 484 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 KBTBD12Q3ZCT8 623 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 RNF149Q8NC42 400 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 CCDC126Q96EE4 140 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 ERAP1Q9NZ08 941 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 KCNN4O15554 427 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 RGL1Q9NZL6 768 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 TBX20Q9UMR3 447 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 Q4G0T1 1027 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 RBBP8NLQ8NC74 664 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 ARMC2Q8NEN0 867 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZCCHC17Q9NP64 241 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 GRID1Q9ULK0 1009 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 A8MXQ7 604 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 ANGPT2O15123 496 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 ICAM1P05362 532 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 NNMTP40261 264 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 SLC26A2P50443 739 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 RAD23BP54727 409 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 DCAF4L1Q3SXM0 396 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 GJD4Q96KN9 370 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 AGPAT3Q9NRZ7 376 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 RAD51CO43502 376 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 NMT1P30419 496 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 REXO1L1PQ8IX06 675 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 CXorf38Q8TB03 319 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 RNF103-CHMP3A0A140T963 221 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 POLE2P56282 527 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 KRT82Q9NSB4 513 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 RARGP13631 454 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 PDK2Q15119 407 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 EFHC1Q5JVL4 640 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 EEPD1Q7L9B9 569 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 LRRC6Q86X45 466 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 SEPT1Q8WYJ6 367 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 NCLNQ969V3 563 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 VCPIP1Q96JH7 1222 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 PRR5LQ6MZQ0 368 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 RRN3P2A6NIE6 340 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 KPNB1Q14974 876 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZNF394Q53GI3 561 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 TFDP3Q5H9I0 405 aa12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 USP13Q92995 863 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-203ENST00000366766 C16orf96A6NNT2 1141 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 GEMIN4P57678 1058 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 IMPG1Q17R60 797 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 PCSK1NQ9UHG2 260 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 TMEM120BA0PK00 339 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 VGLL3A8MV65 326 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 HOXD10P28358 340 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 E2F4Q16254 413 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 XPO7Q9UIA9 1087 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 UBR1Q8IWV7 1749 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 TEKT2Q9UIF3 430 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 CYP11B2P19099 503 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 STX3Q13277 289 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 MFSD14CQ5VZR4 134 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 SMYD3Q9H7B4 428 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 ADA2Q9NZK5 511 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZNF235Q14590 738 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 CCNYL1Q8N7R7 359 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 PARP4Q9UKK3 1724 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 H0Y3Z8 333 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 GYS2P54840 703 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 SLC13A5Q86YT5 568 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 CNPY3Q9BT09 278 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 SRRM3A6NNA2 597 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 FASTKD1Q53R41 847 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 EXD1Q8NHP7 514 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 PGBD4Q96DM1 585 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 AIPL1Q9NZN9 384 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 DBR1Q9UK59 544 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 E7ENQ6 273 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 COMTP21964 271 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 MAGEA4P43358 317 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 SV2CQ496J9 727 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 CATSPER3Q86XQ3 398 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms