RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 CCDC126Q96EE4 140 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 TUFT1Q9NNX1 390 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 TCHHQ07283 1943 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 CCT8L1PA6NM43 557 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 CNOT3O75175 753 aaKnown RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 ECDO95905 644 aaPredicted RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 FTLP02792 175 aaPredicted RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 GYG1P46976 350 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 CATSPER4Q7RTX7 472 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 CYP4Z1Q86W10 505 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 ATPAF2Q8N5M1 289 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 SNRNP27Q8WVK2 155 aaKnown RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 CATSPER2Q96P56 530 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 C3orf70A6NLC5 250 aaPredicted RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 ITGA1P56199 1179 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 TWF2Q6IBS0 349 aaKnown RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 RCOR2Q8IZ40 523 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 DCLRE1BQ9H816 532 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 PEX1O43933 1283 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 CLPTM1O96005 669 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 SARSP49591 514 aaKnown RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 CCT8P50990 548 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 KDM5CP41229 1560 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 MED26O95402 600 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 NUDT2P50583 147 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 TPI1P60174 286 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 NSL1Q96IY1 281 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 RGS20O76081 388 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 MTMR1Q13613 665 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 NFIL3Q16649 462 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 CACHD1Q5VU97 1274 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 UGT3A1Q6NUS8 523 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 PCMTD2Q9NV79 361 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 CYP2D7A0A087X1C5 515 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 GCLMP48507 274 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 MAPKAPK2P49137 400 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 TAF2Q6P1X5 1199 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 RNF25Q96BH1 459 aaPredicted RBP9.71□□□□□ -0.86
VPS13A-203ENST00000360280 FNTAP49354 379 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 BCAMP50895 628 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 CYP4Z2PQ8N1L4 340 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 C2orf40Q9H1Z8 148 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 NDUFS3O75489 264 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 DCTN2Q13561 401 aaKnown RBP9.71□□□□□ -0.86
VPS13A-203ENST00000360280 TSEN34Q9BSV6 310 aaKnown RBP9.71□□□□□ -0.86
VPS13A-203ENST00000360280 F5H423 210 aaPredicted RBP9.71□□□□□ -0.86
VPS13A-203ENST00000360280 SH2B2O14492 632 aaPredicted RBP9.71□□□□□ -0.86
VPS13A-203ENST00000360280 PRIM2P49643 509 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 KIAA0408Q6ZU52 694 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 NOD2Q9HC29 1040 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 TMCC3Q9ULS5 477 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 IGF2BP3O00425 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
VPS13A-203ENST00000360280 ZNF23P17027 643 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 C4orf22Q6V702 233 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 TBC1D22BQ9NU19 505 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 STK39Q9UEW8 545 aa9.71□□□□□ -0.86
VPS13A-203ENST00000360280 SCNN1DP51172 638 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 FLAD1Q8NFF5 587 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 C1orf54Q8WWF1 131 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 VAMP7P51809 220 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 OASLQ15646 514 aaKnown RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 FAM160B2Q86V87 743 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 IFNEQ86WN2 208 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 RIN3Q8TB24 985 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 UBXN6Q9BZV1 441 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 PLEKHA5Q9HAU0 1116 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 MARCOQ9UEW3 520 aaPredicted RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 IPPQ9Y573 584 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 SFNP31947 248 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 PUDPQ08623 228 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ZNF211Q13398 564 aaPredicted RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 SYCP2LQ5T4T6 812 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ERBB4Q15303 1308 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 PTK6Q13882 451 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 TSNQ15631 228 aaKnown RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ZNF560Q96MR9 790 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 HMG20AQ9NP66 347 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 HDAC6Q9UBN7 1215 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 GRID1Q9ULK0 1009 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 LIFRP42702 1097 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ANKMY2Q8IV38 441 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 RMND5AQ9H871 391 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 PCSK1NQ9UHG2 260 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 KIAA0556O60303 1618 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 QRICH2Q9H0J4 1663 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 AATKQ6ZMQ8 1374 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 EPS8Q12929 822 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ITIH4Q14624 930 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 STX12Q86Y82 276 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 TNIP3Q96KP6 325 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 GPR108Q9NPR9 543 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 RGS18Q9NS28 235 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 MAP3K20Q9NYL2 800 aaKnown RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 TPP2P29144 1249 aaPredicted RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 AKT1P31749 480 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ZNF394Q53GI3 561 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 TGFBR2P37173 567 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 CHRNDQ07001 517 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 CROCCP3Q8IVE0 287 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms