RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 CDCA3Q99618 268 aaPredicted RBP20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 SRRTQ9BXP5 876 aaKnown RBP20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PCDHB8Q9UN66 801 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ANK1P16157 1881 aa20.64■□□□□ 0.9
HLA-DRB1-201ENST00000360004 KPNA7A9QM74 516 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 H7C4K7 107 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 GNA14O95837 355 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CCDC192P0DO97 292 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 IGFBP6P24592 240 aaPredicted RBP20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 DLG4P78352 724 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 LLGL2Q6P1M3 1020 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 FOXR2Q6PJQ5 311 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 RNF168Q8IYW5 571 aaPredicted RBP20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CCDC150Q8NCX0 1101 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 PLEKHO2Q8TD55 490 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 HPDLQ96IR7 371 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 SENP8Q96LD8 212 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 DUSP9Q99956 384 aaKnown RBP20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CHST7Q9NS84 486 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CLDND1Q9NY35 253 aa20.64■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CYB561D2O14569 222 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 IKBKBO14920 756 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 HUS1O60921 280 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 FGFR3P22607 806 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ERCC5P28715 1186 aaPredicted RBP20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 PIK3CAP42336 1068 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 GCLMP48507 274 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 YWHAHQ04917 246 aaPredicted RBP20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 HYAL1Q12794 435 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 KIAA0319Q5VV43 1072 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ZNF280DQ6N043 979 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ELMSAN1Q6PJG2 1045 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CD300LGQ6UXG3 332 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 PPFIBP1Q86W92 1011 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 PIK3R5Q8WYR1 880 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 IMPG2Q9BZV3 1241 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 MAGEC2Q9UBF1 373 aaPredicted RBP20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 DSEQ9UL01 958 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 TIMM13Q9Y5L4 95 aaPredicted RBP20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 IRAK3Q9Y616 596 aa20.63■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CNPP09543 421 aaKnown RBP20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 RPL17P18621 184 aaKnown RBP20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 NDUFV1P49821 464 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ARPP19P56211 112 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 TNNC1P63316 161 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ENPEPQ07075 957 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 DUSP6Q16828 381 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CTXN3Q4LDR2 81 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CT47A1Q5JQC4 288 aaPredicted RBP20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 VARS2Q5ST30 1063 aaKnown RBP20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 FRMD5Q7Z6J6 570 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 FAM114A1Q8IWE2 563 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ZC3H3Q8IXZ2 948 aaKnown RBP20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 GPR65Q8IYL9 337 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ZNF516Q92618 1163 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 KLHL5Q96PQ7 755 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 MMS19Q96T76 1030 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 SIX4Q9UIU6 781 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 SNX9Q9Y5X1 595 aa20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 PRRC2BQ5JSZ5 2229 aaKnown RBP20.62■□□□□ 0.89
HLA-DRB1-201ENST00000360004 M0QZQ0 153 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 SPTLC1O15269 473 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 TEX28O15482 410 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CLASP2O75122 1294 aaKnown RBP20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 EFEMP2O95967 443 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 GTF2F1P35269 517 aaKnown RBP eCLIP20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 MXI1P50539 228 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 TYRO3Q06418 890 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 NCOA4Q13772 614 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ZNF699Q32M78 642 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 TDRD10Q5VZ19 366 aaKnown RBP20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 OVOS1Q6IE37 1185 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 THEM5Q8N1Q8 247 aa20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 NAT10Q9H0A0 1025 aaKnown RBP20.61■□□□□ 0.89
HLA-DRB1-201ENST00000360004 GLUD1P00367 558 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 TYMPP19971 482 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 ATICP31939 592 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 GTF2H1P32780 548 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 AARSP49588 968 aaKnown RBP eCLIP20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 MYL6P60660 151 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CLDN10P78369 228 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 NFKBIBQ15653 356 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 KRT39Q6A163 491 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 SV2AQ7L0J3 742 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 PALB2Q86YC2 1186 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 EFHBQ8N7U6 833 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 LNX1Q8TBB1 728 aaPredicted RBP20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CASP10Q92851 521 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 HLA-CQ95604 372 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 GZF1Q9H116 711 aaPredicted RBP20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 RXFP1Q9HBX9 757 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 TMEM8AQ9HCN3 771 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 FNIP2Q9P278 1114 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CDY1Q9Y6F8 540 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 SZT2Q5T011 3432 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 TRANK1O15050 2925 aa20.6■□□□□ 0.89
HLA-DRB1-201ENST00000360004 C4BPAP04003 597 aaKnown RBP20.59■□□□□ 0.89
HLA-DRB1-201ENST00000360004 P4HA1P13674 534 aa20.59■□□□□ 0.89
HLA-DRB1-201ENST00000360004 CPB1P15086 417 aa20.59■□□□□ 0.89
HLA-DRB1-201ENST00000360004 OR1D2P34982 312 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms