RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SCFD2Q8WU76 684 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 FAM53CQ9NYF3 392 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 RARGP13631 454 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 SAT1P21673 171 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 ORC1Q13415 861 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 CUL2Q13617 745 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 ASTE1Q2TB18 679 aaPredicted RBP12.95□□□□□ -0.34
COL20A1-201ENST00000358894 SWT1Q5T5J6 900 aaKnown RBP12.95□□□□□ -0.34
COL20A1-201ENST00000358894 C11orf63Q6NUN7 778 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
COL20A1-201ENST00000358894 FAM167AQ96KS9 214 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 SPATA33Q96N06 139 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 KLF6Q99612 283 aaPredicted RBP12.95□□□□□ -0.34
COL20A1-201ENST00000358894 AJAP1Q9UKB5 411 aaPredicted RBP12.95□□□□□ -0.34
COL20A1-201ENST00000358894 STRIP2Q9ULQ0 834 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 GJB6O95452 261 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 COG7P83436 770 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 SKOR1P84550 965 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 BTNL9Q6UXG8 535 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 SPATA21Q7Z572 469 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 DPP9Q86TI2 863 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 SPATA24Q86W54 205 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 GBP7Q8N8V2 638 aaPredicted RBP12.95□□□□□ -0.34
COL20A1-201ENST00000358894 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 ATP2A3Q93084 1043 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 MED10Q9BTT4 135 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 TRABDQ9H4I3 376 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 GGA3Q9NZ52 723 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 MYH3P11055 1940 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 GRAP2O75791 330 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 SHBGP04278 402 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 MAGEA4P43358 317 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 CDH6P55285 790 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 SNRPFP62306 86 aaKnown RBP12.94□□□□□ -0.34
COL20A1-201ENST00000358894 PDE1BQ01064 536 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 STAT4Q14765 748 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 HIF1AQ16665 826 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 TMCO4Q5TGY1 634 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 KIF2BQ8N4N8 673 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 FEZF2Q8TBJ5 459 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 ECT2Q9H8V3 914 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
COL20A1-201ENST00000358894 TUBGCP6Q96RT7 1819 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 MAFGO15525 162 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 KRT7P08729 469 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 DAB2IPQ5VWQ8 1189 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 PPM1NQ8N819 430 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 CFAP61Q8NHU2 1237 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 MAML1Q92585 1016 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 MIEF2Q96C03 454 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 HES6Q96HZ4 224 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 ZBTB45Q96K62 511 aaPredicted RBP12.94□□□□□ -0.34
COL20A1-201ENST00000358894 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 TXLNGQ9NUQ3 528 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 ROBO1Q9Y6N7 1651 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 MAPK13O15264 365 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 PPATQ06203 517 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 IFRD2Q12894 506 aaPredicted RBP12.94□□□□□ -0.34
COL20A1-201ENST00000358894 C1orf228Q6PIY5 440 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 SEPT1Q8WYJ6 367 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 TTC25Q96NG3 672 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 MTMR12Q9C0I1 747 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 C17orf75Q9HAS0 396 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 BATF3Q9NR55 127 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 USP15Q9Y4E8 981 aaPredicted RBP12.94□□□□□ -0.34
COL20A1-201ENST00000358894 COL18A1P39060 1754 aa12.94□□□□□ -0.34
COL20A1-201ENST00000358894 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
COL20A1-201ENST00000358894 ARHGAP42A6NI28 874 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 OATP04181 439 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 TNFRSF8P28908 595 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 BACE1P56817 501 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 NFX1Q12986 1120 aaKnown RBP12.93□□□□□ -0.34
COL20A1-201ENST00000358894 KCNT1Q5JUK3 1230 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 TRPM8Q7Z2W7 1104 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 TTC13Q8NBP0 860 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 LRRC37BQ96QE4 947 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 CHST7Q9NS84 486 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 DDX20Q9UHI6 824 aaKnown RBP12.93□□□□□ -0.34
COL20A1-201ENST00000358894 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 CCT8L1PA6NM43 557 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 CDC25CP30307 473 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 ITGB3BPQ13352 177 aaPredicted RBP12.93□□□□□ -0.34
COL20A1-201ENST00000358894 KIF22Q14807 665 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 UGCGQ16739 394 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 FAM83AQ86UY5 434 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 RCOR2Q8IZ40 523 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 ARHGAP24Q8N264 748 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 OSBPL1AQ9BXW6 950 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 NR2E1Q9Y466 385 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 MYO5AQ9Y4I1 1855 aaKnown RBP12.93□□□□□ -0.34
COL20A1-201ENST00000358894 IGLV3-22A0A075B6J6 115 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 CST8O60676 142 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 EFNA5P52803 228 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 PSMD6Q15008 389 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 PRELID2Q8N945 189 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 TMC2Q8TDI7 906 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms