RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ZNF618Q5T7W0 954 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 C18orf8Q96DM3 657 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 C20orf96Q9NUD7 363 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 GRK2P25098 689 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 SMARCA1P28370 1054 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PTPN12Q05209 780 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 MTFR1Q15390 333 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 SKA1Q96BD8 255 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 VPS50Q96JG6 964 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 SNX13Q9Y5W8 968 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 CYP2D7A0A087X1C5 515 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 A8MUI8 341 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 EVPLLA8MZ36 301 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 GALCP54803 685 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ATP2C1P98194 919 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TFDP2Q14188 446 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 FRMD5Q7Z6J6 570 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 RHOT1Q8IXI2 618 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TPCN2Q8NHX9 752 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 FAM111AQ96PZ2 611 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 CCSER1Q9C0I3 900 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ADCY6O43306 1168 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ATMINO43313 823 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PYGMP11217 842 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 NUP93Q8N1F7 819 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 BBS2Q9BXC9 721 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TRNAU1APQ9NX07 287 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PNMA3Q9UL41 463 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 FRMPD2Q68DX3 1309 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ENTPD5O75356 428 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 POLR2MP0CAP2 368 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 MYL2P10916 166 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 MAP3K10Q02779 954 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PPP1R15BQ5SWA1 713 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 CREG2Q8IUH2 290 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 BORCS5Q969J3 196 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TLR10Q9BXR5 811 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 COG4Q9H9E3 785 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 RSL24D1Q9UHA3 163 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 CD109Q6YHK3 1445 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 NEMP1O14524 444 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 CTDNEP1O95476 244 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 RARGP13631 454 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ENO3P13929 434 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 USP46P62068 366 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ARID3BQ8IVW6 561 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 KIAA1683Q9H0B3 1180 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TRIM24O15164 1050 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ARMC4Q5T2S8 1044 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 THOC7Q6I9Y2 204 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 FRA10AC1Q70Z53 315 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 COQ6Q9Y2Z9 468 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 NCKAP5LQ9HCH0 1330 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 DMC1Q14565 340 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 GRM4Q14833 912 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 EIF1ADQ8N9N8 165 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 SLC38A10Q9HBR0 1119 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 FANCAO15360 1455 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PDZK1P1A8MUH7 402 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 KRT7P08729 469 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 SNRPAP09012 282 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 YARSP54577 528 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ELMSAN1Q6PJG2 1045 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TMPRSS6Q8IU80 811 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 LCORLQ8N3X6 602 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ATP8B4Q8TF62 1192 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TBC1D10AQ9BXI6 508 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PRR23D1E9PI22 279 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ALBP02768 609 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ALOX5P09917 674 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TMEM253P0C7T8 217 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PRR23D2P0DMB1 279 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ETS2P15036 469 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PSMA4P25789 261 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PMLP29590 882 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ARL4AP40617 200 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 SGMS1Q86VZ5 419 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 CDKL3Q8IVW4 592 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 SDR42E1Q8WUS8 393 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 MTMR8Q96EF0 704 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 DMTF1Q9Y222 760 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 NEU2Q9Y3R4 380 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 XPOTO43592 962 aaKnown RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 IDH3BO43837 385 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ITGA4P13612 1032 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 NLRP10Q86W26 655 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 DNAAF3Q8N9W5 541 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 C6orf62Q9GZU0 229 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-203ENST00000358544 RWDD3Q9Y3V2 267 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PCNX2A6NKB5 2137 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 XIAPP98170 497 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 ACAP1Q15027 740 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 KLHDC7AQ5VTJ3 777 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 SEMA4AQ9H3S1 761 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 TRIM39Q9HCM9 518 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 PNPLA3Q9NST1 481 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 KLHL11Q9NVR0 708 aa6.36□□□□□ -1.39
VPS13B-203ENST00000358544 AFF2P51816 1311 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms