RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 CETN2P41208 172 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 MMP13P45452 471 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 CDH8P55286 799 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 MAMLD1Q13495 774 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 MPP2Q14168 576 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 CLUL1Q15846 466 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 CNGA2Q16280 664 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 DALRD3Q5D0E6 543 aaKnown RBP8.77□□□□□ -1.01
CD46-205ENST00000358170 XKR3Q5GH77 459 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 NIPA1Q7RTP0 329 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 RHOT1Q8IXI2 618 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 KIRREL3Q8IZU9 778 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 RNF149Q8NC42 400 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 TMC2Q8TDI7 906 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 ZNF606Q8WXB4 792 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 VTI1AQ96AJ9 217 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 PGM2Q96G03 612 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 STMN4Q9H169 189 aaPredicted RBP8.77□□□□□ -1.01
CD46-205ENST00000358170 RNF19AQ9NV58 838 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 CYP39A1Q9NYL5 469 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 NKIRAS1Q9NYS0 192 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 NINJ2Q9NZG7 142 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 TJP2Q9UDY2 1190 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 SYNPO2Q9UMS6 1093 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 TRIM33Q9UPN9 1127 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 NAALADL1Q9UQQ1 740 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 COL11A2P13942 1736 aaPredicted RBP8.77□□□□□ -1.01
CD46-205ENST00000358170 KAT6AQ92794 2004 aa8.77□□□□□ -1.01
CD46-205ENST00000358170 EXOC1LA0A1B0GW35 172 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 PROSCO94903 275 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 FSBPO95073 299 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 TTC4O95801 387 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 PGK2P07205 417 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 NEFHP12036 1026 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 PTPRAP18433 802 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 HMGB2P26583 209 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 DRG2P55039 364 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 LY6KQ17RY6 165 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ZACNQ401N2 412 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 DNAJC24Q6P3W2 148 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 CYB5D1Q6P9G0 228 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 C6orf89Q6UWU4 347 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 RHPN2Q8IUC4 686 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ZBED8Q8IZ13 594 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 PPP1R13LQ8WUF5 828 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ATXN2LQ8WWM7 1075 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 PRPF31Q8WWY3 499 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 DDX27Q96GQ7 796 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 TACO1Q9BSH4 297 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 TEX13BQ9BXU2 312 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 R3HDMLQ9H3Y0 253 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 LRRC19Q9H756 370 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ACAD9Q9H845 621 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 LTBP1Q14766 1721 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 C10orf71Q711Q0 1435 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 EIF4E1BA6NMX2 242 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 UBOX5O94941 541 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 GGPS1O95749 300 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ITIH2P19823 946 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ATP4AP20648 1035 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 BPIFB4P59827 614 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 GCNT1Q02742 428 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 SMAD1Q15797 465 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 STXBP2Q15833 593 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 GPAT2Q6NUI2 795 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 CCDC33Q8N5R6 958 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 CCDC63Q8NA47 563 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 TGS1Q96RS0 853 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 C12orf65Q9H3J6 166 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.76□□□□□ -1.013e-6■■■□□ 15.7
CD46-205ENST00000358170 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 COQ4Q9Y3A0 265 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 C4BPAP04003 597 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 SUPT20HL2P0C7V6 817 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 NFX1Q12986 1120 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 SUPT20HL1Q3ZLR7 823 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 FKBP1CQ5VVH2 108 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ZNF772Q68DY9 489 aaPredicted RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 GADL1Q6ZQY3 521 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 FUKQ8N0W3 1084 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ABRAQ8N0Z2 381 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 CNPY4Q8N129 248 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 GPRASP2Q96D09 838 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 ZNF317Q96PQ6 595 aaPredicted RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 CCDC77Q9BR77 488 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 TRAIPQ9BWF2 469 aa8.76□□□□□ -1.01
CD46-205ENST00000358170 NSRP1Q9H0G5 558 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 MRPL47Q9HD33 250 aaKnown RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 ZNF214Q9UL59 606 aaPredicted RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 GREB1LQ9C091 1923 aaPredicted RBP8.76□□□□□ -1.01
CD46-205ENST00000358170 CEP350Q5VT06 3117 aa8.75□□□□□ -1.01
CD46-205ENST00000358170 NRXN2Q9P2S2 1712 aa8.75□□□□□ -1.01
CD46-205ENST00000358170 NOP56O00567 594 aaKnown RBP8.75□□□□□ -1.01
CD46-205ENST00000358170 GRAP2O75791 330 aa8.75□□□□□ -1.01
CD46-205ENST00000358170 CPP00450 1065 aa8.75□□□□□ -1.01
CD46-205ENST00000358170 OATP04181 439 aa8.75□□□□□ -1.01
CD46-205ENST00000358170 MAGEA4P43358 317 aa8.75□□□□□ -1.01
CD46-205ENST00000358170 STAT5BP51692 787 aa8.75□□□□□ -1.01
CD46-205ENST00000358170 HADHBP55084 474 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms