RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 FMO1Q01740 532 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 CDR2Q01850 454 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 PKN2Q16513 984 aaKnown RBP18.27■□□□□ 0.52
TPM1-205ENST00000357980 SCARA5Q6ZMJ2 495 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 LRRC8DQ7L1W4 858 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 HACE1Q8IYU2 909 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 RPUSD2Q8IZ73 545 aaKnown RBP18.27■□□□□ 0.52
TPM1-205ENST00000357980 TXLNBQ8N3L3 684 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 RBBP8NLQ8NC74 664 aaPredicted RBP18.27■□□□□ 0.52
TPM1-205ENST00000357980 GSTCDQ8NEC7 633 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 ADAM2Q99965 735 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 CISHQ9NSE2 258 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 MYO1AQ9UBC5 1043 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 MMEP08473 750 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 WEE2P0C1S8 567 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 ITGA4P13612 1032 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 BPIFB4P59827 614 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 BFSP2Q13515 415 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 AGMOQ6ZNB7 445 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 ANKRD33Q7Z3H0 272 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 LRRC52Q8N7C0 313 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 ZFP42Q96MM3 310 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 PPP1R10Q96QC0 940 aaKnown RBP18.26■□□□□ 0.51
TPM1-205ENST00000357980 PCDHB18PQ96TA0 734 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 PPEF2O14830 753 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 CALCAP01258 141 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 TFRCP02786 760 aaKnown RBP18.26■□□□□ 0.51
TPM1-205ENST00000357980 COL6A1P12109 1028 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 CYP3A5P20815 502 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 SOX4Q06945 474 aaPredicted RBP18.26■□□□□ 0.51
TPM1-205ENST00000357980 TAF3Q5VWG9 929 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 C9orf57Q5W0N0 161 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 LPPQ93052 612 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 SDCBP2Q9H190 292 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 TAS2R14Q9NYV8 317 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 DNAI1Q9UI46 699 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 SALL4Q9UJQ4 1053 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 INTUQ9ULD6 942 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 GIT1Q9Y2X7 761 aa18.26■□□□□ 0.51
TPM1-205ENST00000357980 PIRO00625 290 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 XPOTO43592 962 aaKnown RBP18.25■□□□□ 0.51
TPM1-205ENST00000357980 PQBP1O60828 265 aaKnown RBP18.25■□□□□ 0.51
TPM1-205ENST00000357980 CD58P19256 250 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 MLH1P40692 756 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 GPNMBQ14956 572 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 SLC39A5Q6ZMH5 540 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 ZNF677Q86XU0 584 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 DNAAF5Q86Y56 855 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 KIF18AQ8NI77 898 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 ZNF592Q92610 1267 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 SMYD3Q9H7B4 428 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 CYP3A43Q9HB55 503 aa18.25■□□□□ 0.51
TPM1-205ENST00000357980 R3HCC1Q9Y3T6 440 aaKnown RBP18.25■□□□□ 0.51
TPM1-205ENST00000357980 MYH10P35580 1976 aa18.24■□□□□ 0.51
TPM1-205ENST00000357980 BTNL10A8MVZ5 291 aa18.24■□□□□ 0.51
TPM1-205ENST00000357980 P4HA1P13674 534 aa18.24■□□□□ 0.51
TPM1-205ENST00000357980 RAP1GAPP47736 663 aa18.24■□□□□ 0.51
TPM1-205ENST00000357980 CTCFP49711 727 aaPredicted RBP18.24■□□□□ 0.51
TPM1-205ENST00000357980 YWHAEP62258 255 aaKnown RBP18.24■□□□□ 0.51
TPM1-205ENST00000357980 MYO1EQ12965 1108 aa18.24■□□□□ 0.51
TPM1-205ENST00000357980 ZNF569Q5MCW4 686 aa18.24■□□□□ 0.51
TPM1-205ENST00000357980 C1orf53Q5VUE5 145 aa18.24■□□□□ 0.51
TPM1-205ENST00000357980 GAD1Q99259 594 aa18.24■□□□□ 0.51
TPM1-205ENST00000357980 SEPT11Q9NVA2 429 aaKnown RBP18.24■□□□□ 0.51
TPM1-205ENST00000357980 TDRD15B5MCY1 1934 aaKnown RBP18.24■□□□□ 0.51
TPM1-205ENST00000357980 MACROD2A1Z1Q3 448 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 ARL5CA6NH57 179 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 TLR3O15455 904 aaKnown RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 NBNO60934 754 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 H2AFZP0C0S5 128 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 GZMAP12544 262 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 SKIP12755 728 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 GNA15P30679 374 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 GJA8P48165 433 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 AFF1P51825 1210 aaKnown RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 ATN1P54259 1190 aaPredicted RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 CDH8P55286 799 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 H2AFVQ71UI9 128 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 ZNF598Q86UK7 904 aaKnown RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 RTN4RL1Q86UN2 441 aaPredicted RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 DIS3LQ8TF46 1054 aaKnown RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 LINC01599Q8WXQ3 324 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 ISCUQ9H1K1 167 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 FAM124BQ9H5Z6 455 aaPredicted RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 GOLGA2P5Q9HBQ8 144 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 RGS18Q9NS28 235 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 PAXBP1Q9Y5B6 917 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 SCN5AQ14524 2016 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 HSPA1AP0DMV8 641 aaKnown RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 HSPA1BP0DMV9 641 aaKnown RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 LRPAP1P30533 357 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 GALCP54803 685 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 TNNC1P63316 161 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 INCA1Q0VD86 236 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 ECHDC2Q86YB7 292 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 SLC35F6Q8N357 371 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 SECISBP2LQ93073 1101 aaKnown RBP18.23■□□□□ 0.51
TPM1-205ENST00000357980 TOX2Q96NM4 488 aa18.23■□□□□ 0.51
TPM1-205ENST00000357980 TET1Q8NFU7 2136 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms