RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SLC9A9Q8IVB4 645 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 MCOLN2Q8IZK6 566 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 C10orf82Q8WW14 230 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 STRA6Q9BX79 667 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 NMRK1Q9NWW6 199 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 RAB20Q9NX57 234 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 LGALS13Q9UHV8 139 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 BBOX1O75936 387 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 RFX1P22670 979 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 ALDH3A1P30838 453 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 STAT2P52630 851 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 PDIA2Q13087 525 aaKnown RBP10.73□□□□□ -0.69
PTPRA-203ENST00000356147 RCN2Q14257 317 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 KPNB1Q14974 876 aaKnown RBP10.73□□□□□ -0.69
PTPRA-203ENST00000356147 CRY2Q49AN0 593 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 KRT39Q6A163 491 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 TXNRD3NBQ6F5E7 133 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 TMEM179Q6ZVK1 233 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 TTC7BQ86TV6 843 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 LRRC6Q86X45 466 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 SCYL3Q8IZE3 742 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 AGGF1Q8N302 714 aaeCLIP10.73□□□□□ -0.69
PTPRA-203ENST00000356147 CCDC89Q8N998 374 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 GRK7Q8WTQ7 553 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 ZNF75CPQ92670 426 aaPredicted RBP10.73□□□□□ -0.69
PTPRA-203ENST00000356147 PTPRN2Q92932 1015 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 ARL8BQ9NVJ2 186 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 EURLQ9NYK6 297 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 ARMCX1Q9P291 453 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 SLC17A7Q9P2U7 560 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 STARD13Q9Y3M8 1113 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 SPATA31A6Q5VVP1 1343 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 LUC7L3O95232 432 aaKnown RBP10.73□□□□□ -0.69
PTPRA-203ENST00000356147 NEFHP12036 1026 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 GYS1P13807 737 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 CNGA1P29973 690 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 RARRES1P49788 294 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 RPL7AP62424 266 aaKnown RBP10.73□□□□□ -0.69
PTPRA-203ENST00000356147 ACVR2BQ13705 512 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 ZC3H18Q86VM9 953 aaKnown RBP10.73□□□□□ -0.69
PTPRA-203ENST00000356147 LMNTD2Q8IXW0 634 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 ASAP3Q8TDY4 903 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 MORC4Q8TE76 937 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 DENND1AQ8TEH3 1009 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 TEKT4Q8WW24 435 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 NRG4Q8WWG1 115 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 TMEM121Q9BTD3 319 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 COA1Q9GZY4 146 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 LRRC42Q9Y546 428 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 KAT6AQ92794 2004 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 LRRD1A4D1F6 860 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 ATP6V1C1P21283 382 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
PTPRA-203ENST00000356147 POLE2P56282 527 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 KLF1Q13351 362 aaPredicted RBP10.72□□□□□ -0.69
PTPRA-203ENST00000356147 TFDP1Q14186 410 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 SEPT7Q16181 437 aaKnown RBP10.72□□□□□ -0.69
PTPRA-203ENST00000356147 CPXCR1Q8N123 301 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 FBXL13Q8NEE6 735 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 WDR60Q8WVS4 1066 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 SLCO2A1Q92959 643 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 FAM213AQ9BRX8 229 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 CADM1Q9BY67 442 aaKnown RBP10.72□□□□□ -0.69
PTPRA-203ENST00000356147 TMEM206Q9H813 350 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 KCNH7Q9NS40 1196 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 KANSL3Q9P2N6 904 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPRA-203ENST00000356147 SKIV2L2P42285 1042 aaKnown RBP10.72□□□□□ -0.69
PTPRA-203ENST00000356147 WNT7BP56706 349 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 PDK4Q16654 411 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 PARP6Q2NL67 630 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 MFSD7Q6UXD7 560 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 CLNKQ7Z7G1 428 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 KIFAP3Q92845 792 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 GRAMD1AQ96CP6 724 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 AGBL1Q96MI9 1066 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 COL20A1Q9P218 1284 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 HEY2Q9UBP5 337 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 KCNG1Q9UIX4 513 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 C2CD2Q9Y426 696 aa10.72□□□□□ -0.69
PTPRA-203ENST00000356147 UMODL1Q5DID0 1318 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 A0A1B0GVG6 124 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 DENND3A2RUS2 1198 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 CAPN9O14815 690 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 NVLO15381 856 aaKnown RBP10.71□□□□□ -0.69
PTPRA-203ENST00000356147 ZBTB16Q05516 673 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 ACSBG2Q5FVE4 666 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 AP1ARQ63HQ0 302 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 NGLY1Q96IV0 654 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 CFAP57Q96MR6 1250 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 GLIS2Q9BZE0 524 aaPredicted RBP10.71□□□□□ -0.69
PTPRA-203ENST00000356147 PAPOLBQ9NRJ5 636 aaKnown RBP10.71□□□□□ -0.69
PTPRA-203ENST00000356147 STK24Q9Y6E0 443 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 WASF2Q9Y6W5 498 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 UBE4BO95155 1302 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 MYPNQ86TC9 1320 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 TLR3O15455 904 aaKnown RBP10.71□□□□□ -0.69
PTPRA-203ENST00000356147 DCTN3O75935 186 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms