RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 IGFLR1Q9H665 355 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 IGFBP4P22692 258 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 DNAJB2P25686 324 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 QARSP47897 775 aaKnown RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 AP3B2Q13367 1082 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 ZNF589Q86UQ0 364 aaPredicted RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 CLYBLQ8N0X4 340 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 EME1Q96AY2 570 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 PUS7LQ9H0K6 701 aaKnown RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 LIMA1Q9UHB6 759 aaKnown RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 ATP6V1HQ9UI12 483 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 PYCARDQ9ULZ3 195 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 PSMD12O00232 456 aaPredicted RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 RPS6KA5O75582 802 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 AVPR1AP37288 418 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 CCDC137Q6PK04 289 aaKnown RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 NACC2Q96BF6 587 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 PARD6BQ9BYG5 372 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 TRIM13O60858 407 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 NOS3P29474 1203 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 DRAP1Q14919 205 aaPredicted RBP18.04■□□□□ 0.48
COL27A1-201ENST00000356083 MAPRE2Q15555 327 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 HIST2H2ACQ16777 129 aaPredicted RBP18.04■□□□□ 0.48
COL27A1-201ENST00000356083 HIST2H2AA3Q6FI13 130 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 P3H2Q8IVL5 708 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 CPA5Q8WXQ8 436 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 MED8Q96G25 268 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 SIKE1Q9BRV8 207 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 TRIM49BA6NDI0 452 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 ATN1P54259 1190 aaPredicted RBP18.04■□□□□ 0.48
COL27A1-201ENST00000356083 HIC1Q14526 733 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 CASP8Q14790 479 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 IER5Q5VY09 327 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 LXNQ9BS40 222 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 THAP9Q9H5L6 903 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 TMEM132BQ14DG7 1078 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 FBXO40Q9UH90 709 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 CLASP2O75122 1294 aaKnown RBP18.04■□□□□ 0.48
COL27A1-201ENST00000356083 WDR72Q3MJ13 1102 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 RABGAP1LQ5R372 815 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 PRAMEF18Q5VWM3 479 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 TRIM65Q6PJ69 517 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 HEATR4Q86WZ0 1026 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 MMGT1Q8N4V1 131 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 CRLS1Q9UJA2 301 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 NAGPAQ9UK23 515 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 DEAF1O75398 565 aaPredicted RBP18.04■□□□□ 0.48
COL27A1-201ENST00000356083 RBBP4Q09028 425 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 CLEC16AQ2KHT3 1053 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 SHCBP1LQ9BZQ2 653 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 ADAM21Q9UKJ8 722 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 RNASEH1O60930 286 aaKnown RBP18.04■□□□□ 0.48
COL27A1-201ENST00000356083 DSG3P32926 999 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 PGM1P36871 562 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 C11orf57Q6ZUT1 292 aaPredicted RBP18.04■□□□□ 0.48
COL27A1-201ENST00000356083 TMEM143Q96AN5 459 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 TMEM260Q9NX78 707 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 XPO7Q9UIA9 1087 aaKnown RBP18.04■□□□□ 0.48
COL27A1-201ENST00000356083 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
COL27A1-201ENST00000356083 CNTN1Q12860 1018 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 RCN1Q15293 331 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SCARA3Q6AZY7 606 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 NINQ8N4C6 2090 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 UBE3CQ15386 1083 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SMTNL2Q2TAL5 461 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 DPP10Q8N608 796 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 THUMPD3Q9BV44 507 aaKnown RBP18.03■□□□□ 0.48
COL27A1-201ENST00000356083 MPP6Q9NZW5 540 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 HSMCR30P0CW71 290 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 IL13P35225 146 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 ACTN3Q08043 901 aaPredicted RBP18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SLC39A14Q15043 492 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 ST13P5Q8NFI4 369 aaPredicted RBP18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SH3GL2Q99962 352 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SCN3BQ9NY72 215 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 PIPSLA2A3N6 862 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 NCAM1P13591 858 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 ZBED6P86452 979 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 ZNF560Q96MR9 790 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 PRMT1Q99873 361 aaKnown RBP18.03■□□□□ 0.48
COL27A1-201ENST00000356083 KRCC1Q9NPI7 259 aaPredicted RBP18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SATB2Q9UPW6 733 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 TCP11X1B4DZS4 312 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 MYL2P10916 166 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 RGS2P41220 211 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 POU4F1Q01851 419 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 IZUMO1Q8IYV9 350 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 GPT2Q8TD30 523 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 DIABLOQ9NR28 239 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SYBUQ9NX95 663 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 TRPC4Q9UBN4 977 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SYTL1Q8IYJ3 562 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 SEPT12Q8IYM1 358 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 KIFC1Q9BW19 673 aa18.03■□□□□ 0.48
COL27A1-201ENST00000356083 CYP2D6P10635 497 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 SCNN1BP51168 640 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 TMEM132DQ14C87 1099 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 POLD3Q15054 466 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms