RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 TLR9Q9NR96 1032 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 SSX2IPQ9Y2D8 614 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 COQ4Q9Y3A0 265 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 M0QZQ0 153 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 SYN3O14994 580 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 GRM6O15303 877 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 VNN1O95497 513 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 BRCC3P46736 316 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 MYL6P60660 151 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 TIGD5Q53EQ6 642 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 FAM171A1Q5VUB5 890 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
TRIM13-201ENST00000356017 LUZP1Q86V48 1076 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 TMEM130Q8N3G9 435 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 APPL2Q8NEU8 664 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 TAS1R2Q8TE23 839 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 VRTNQ9H8Y1 702 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 NGRNQ9NPE2 291 aaKnown RBP16.72■□□□□ 0.27
TRIM13-201ENST00000356017 RAB20Q9NX57 234 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 GDAP2Q9NXN4 497 aa16.72■□□□□ 0.27
TRIM13-201ENST00000356017 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 SPTLC1O15269 473 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 HLA-DRAP01903 254 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 MYL7Q01449 175 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 GRIN2CQ14957 1233 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 ZNF699Q32M78 642 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 VWA3BQ502W6 1294 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 PDXDC1Q6P996 788 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 TMC7Q7Z402 723 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 GPR65Q8IYL9 337 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 GDPD5Q8WTR4 605 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 TTPALQ9BTX7 342 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 HERC2P3Q9BVR0 1158 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 XYLT2Q9H1B5 865 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 HSD3B7Q9H2F3 369 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 NDST4Q9H3R1 872 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 CHST7Q9NS84 486 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 LMCD1Q9NZU5 365 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 DSEQ9UL01 958 aa16.71■□□□□ 0.27
TRIM13-201ENST00000356017 NLRC5Q86WI3 1866 aa16.71■□□□□ 0.26
TRIM13-201ENST00000356017 EPOPA6NHQ4 379 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 CLSTN1O94985 981 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 ASS1P00966 412 aaKnown RBP16.7■□□□□ 0.26
TRIM13-201ENST00000356017 URODP06132 367 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 CTSAP10619 480 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 ODC1P11926 461 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 P4HA1P13674 534 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 FGFR3P22607 806 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 IGFBP6P24592 240 aaPredicted RBP16.7■□□□□ 0.26
TRIM13-201ENST00000356017 GLUD2P49448 558 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRIM13-201ENST00000356017 KRT31Q15323 416 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 WDR72Q3MJ13 1102 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 ZNF667Q5HYK9 610 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 WDR44Q5JSH3 913 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 DPH6Q7L8W6 267 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 CEP57Q86XR8 500 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 MICAL1Q8TDZ2 1067 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 TCF25Q9BQ70 676 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 VN1R3Q9BXE9 311 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 PRDM12Q9H4Q4 367 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 MRPL17Q9NRX2 175 aaKnown RBP16.7■□□□□ 0.26
TRIM13-201ENST00000356017 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
TRIM13-201ENST00000356017 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 SNX9Q9Y5X1 595 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 KIAA1671Q9BY89 1806 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 GTPBP10A4D1E9 387 aaKnown RBP16.7■□□□□ 0.26
TRIM13-201ENST00000356017 PES1O00541 588 aaKnown RBP16.7■□□□□ 0.26
TRIM13-201ENST00000356017 CYB561D2O14569 222 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 HUS1O60921 280 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 TYMPP19971 482 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 TNNC1P63316 161 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 DSG1Q02413 1049 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 MIIPQ5JXC2 388 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 MRPL38Q96DV4 380 aaKnown RBP16.7■□□□□ 0.26
TRIM13-201ENST00000356017 FAXDC2Q96IV6 333 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 ZBP1Q9H171 429 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 ENTPD7Q9NQZ7 604 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 IRAK3Q9Y616 596 aa16.7■□□□□ 0.26
TRIM13-201ENST00000356017 I3L4J1 428 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 LPXNO60711 386 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 FAM163BP0C2L3 166 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 DNAJB1P25685 340 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 CREMQ03060 361 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 CAMK1Q14012 370 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 SMC1AQ14683 1233 aaKnown RBP16.69■□□□□ 0.26
TRIM13-201ENST00000356017 SCARA3Q6AZY7 606 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 ANKS3Q6ZW76 656 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 TAS1R1Q7RTX1 841 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 METTL23Q86XA0 190 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 TOP6BLQ8N6T0 577 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 SPATA18Q8TC71 538 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 FAM161BQ96MY7 647 aa16.69■□□□□ 0.26
TRIM13-201ENST00000356017 GAS2L1Q99501 681 aaPredicted RBP16.69■□□□□ 0.26
TRIM13-201ENST00000356017 OXCT2Q9BYC2 517 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms