RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ABCE1P61221 599 aaKnown RBP18.9■□□□□ 0.62
COL18A1-202ENST00000355480 STK4Q13043 487 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 RFX8Q6ZV50 586 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 ANO5Q75V66 913 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 NAGPAQ9UK23 515 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 SNX12Q9UMY4 172 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 FHOD1Q9Y613 1164 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 SPATA31A1Q5TZJ5 1347 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 SPATA31A6Q5VVP1 1343 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 RRN3P2A6NIE6 340 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 RPS12P25398 132 aaKnown RBP18.9■□□□□ 0.62
COL18A1-202ENST00000355480 PPP3CCP48454 512 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 HARS2P49590 506 aaKnown RBP18.9■□□□□ 0.62
COL18A1-202ENST00000355480 KRT35Q92764 455 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 SELENONQ9NZV5 590 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 AURKCQ9UQB9 309 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 EXTL3O43909 919 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 CSF1RP07333 972 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 ABHD8Q96I13 439 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 CHP1Q99653 195 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 KCNH7Q9NS40 1196 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 USP31Q70CQ4 1352 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 FOXP2O15409 715 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 NTSR2O95665 410 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 RALBP11234 206 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 LAMC2Q13753 1193 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 GRAMD1AQ96CP6 724 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 TRIM51Q9BSJ1 452 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 LRRC1Q9BTT6 524 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 TMEM8AQ9HCN3 771 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
COL18A1-202ENST00000355480 ZNF185O15231 689 aa18.89■□□□□ 0.62
COL18A1-202ENST00000355480 FMR1Q06787 632 aaKnown RBP eCLIP18.89■□□□□ 0.629e-7■■■□□ 18.8
COL18A1-202ENST00000355480 C6orf10Q5SRN2 563 aa18.89■□□□□ 0.62
COL18A1-202ENST00000355480 SDE2Q6IQ49 451 aa18.89■□□□□ 0.62
COL18A1-202ENST00000355480 COG1Q8WTW3 980 aa18.89■□□□□ 0.62
COL18A1-202ENST00000355480 ZNF512BQ96KM6 892 aaPredicted RBP18.89■□□□□ 0.62
COL18A1-202ENST00000355480 C10orf120Q5SQS8 335 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 CHSY1Q86X52 802 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 YY1AP1Q9H869 796 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 KRT4P19013 534 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 GPAT2Q6NUI2 795 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 RNF180Q86T96 592 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 PCDHB2Q9Y5E7 798 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 TCF7P36402 384 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-202ENST00000355480 ETFBP38117 255 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 BLVRAP53004 296 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 EDRF1Q3B7T1 1238 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 ICA1LQ8NDH6 482 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 PRG3Q9Y2Y8 225 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-202ENST00000355480 PDK1Q15118 436 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 NBPF9Q3BBW0 867 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 PTRHD1Q6GMV3 140 aaKnown RBP18.89■□□□□ 0.61
COL18A1-202ENST00000355480 GLT1D1Q96MS3 346 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 SLITRK1Q96PX8 696 aa18.89■□□□□ 0.61
COL18A1-202ENST00000355480 A0A1B0GTH6 734 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 ZNF263O14978 683 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 ARIH2O95376 493 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 IPMKQ8NFU5 416 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 TAAR1Q96RJ0 339 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 NIF3L1Q9GZT8 377 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 TASP1Q9H6P5 420 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 C20orf96Q9NUD7 363 aaPredicted RBP18.88■□□□□ 0.61
COL18A1-202ENST00000355480 CD274Q9NZQ7 290 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 NEU2Q9Y3R4 380 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 EFCAB14O75071 495 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 GPD1P21695 349 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 GTF2H1P32780 548 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 HNRNPH2P55795 449 aaKnown RBP18.88■□□□□ 0.61
COL18A1-202ENST00000355480 LRRC74AQ0VAA2 488 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 HPDLQ96IR7 371 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 EPB41L4AQ9HCS5 686 aaPredicted RBP18.88■□□□□ 0.61
COL18A1-202ENST00000355480 SSU72P8A0A1W2PR75 194 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 C2CD2LO14523 706 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 EIF3DO15371 548 aaKnown RBP eCLIP18.88■□□□□ 0.614e-6■■□□□ 12.4
COL18A1-202ENST00000355480 CHGBP05060 677 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 NCAM1P13591 858 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 NLRP11P59045 1033 aaKnown RBP18.88■□□□□ 0.61
COL18A1-202ENST00000355480 SHCBP1Q8NEM2 672 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 AGPAT5Q9NUQ2 364 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 TARSL2A2RTX5 802 aaKnown RBP18.88■□□□□ 0.61
COL18A1-202ENST00000355480 FCGRTP55899 365 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 EFHC1Q5JVL4 640 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 XRRA1Q6P2D8 792 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 FBXO33Q7Z6M2 555 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 SNX31Q8N9S9 440 aa18.88■□□□□ 0.61
COL18A1-202ENST00000355480 C17orf102A2RUQ5 167 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 ITIH2P19823 946 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 NPEPPSP55786 919 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 SUPT3HB4E1H0 165 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 PDHA1P08559 390 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 BYSLQ13895 437 aaKnown RBP18.87■□□□□ 0.61
COL18A1-202ENST00000355480 WDR24Q96S15 920 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 PI4K2AQ9BTU6 479 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 TFRCP02786 760 aaKnown RBP18.87■□□□□ 0.61
COL18A1-202ENST00000355480 SLC9A1P19634 815 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 PPP1R2P1Q96PQ5 205 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 GPR63Q9BZJ6 419 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 CFAP99D6REC4 459 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms