RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 OSBPL11Q9BXB4 747 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 UBE2TQ9NPD8 197 aaPredicted RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 TRMT6Q9UJA5 497 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 TPRKBQ9Y3C4 175 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 SLC4A7Q9Y6M7 1214 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 TCP11X1B4DZS4 312 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 SEMA3DO95025 777 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 CCNA2P20248 432 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 EFNA5P52803 228 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 CACHD1Q5VU97 1274 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 SPDYE1Q8NFV5 336 aaPredicted RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 CARD14Q9BXL6 1004 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 MAGEB16A2A368 324 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 IL1RL1Q01638 556 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MESDQ14696 234 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 CCDC142Q17RM4 750 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 BSPRYQ5W0U4 402 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MZT2BQ6NZ67 158 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 FAM47EQ6ZV65 393 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 EZH1Q92800 747 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 ERGIC2Q96RQ1 377 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 RABL2AQ9UBK7 228 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 MAN1B1Q9UKM7 699 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 RABL2BQ9UNT1 228 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SCAF8Q9UPN6 1271 aaKnown RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 CPA3P15088 417 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SPRP35270 261 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 C6orf10Q5SRN2 563 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MICU2Q8IYU8 434 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 EMILIN3Q9NT22 766 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 USE1Q9NZ43 259 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 C6orf203Q9P0P8 240 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 SAP30BPQ9UHR5 308 aaKnown RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 ANKRD6Q9Y2G4 727 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SLC2A3P11169 496 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 CYP2J2P51589 502 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 TTLL12Q14166 644 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 CDC73Q6P1J9 531 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 TMEM154Q6P9G4 183 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MAP3K14Q99558 947 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 GPAMQ9HCL2 828 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 CARD8Q9Y2G2 431 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 WDR37Q9Y2I8 494 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MYO3BQ8WXR4 1341 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 ZNF662Q6ZS27 426 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 ACTRT1Q8TDG2 376 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 C15orf40Q8WUR7 153 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 PGBD1Q96JS3 809 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 RBM15Q96T37 977 aaKnown RBP eCLIP8.38□□□□□ -1.076e-8■□□□□ 8.8
HTT-201ENST00000355072 ANAPC7Q9UJX3 599 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 TMEM120BA0PK00 339 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 NEURL1BA8MQ27 555 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MEI4A8MW99 385 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SRP72O76094 671 aaKnown RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 SLCO1A2P46721 670 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 HSD17B4P51659 736 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 HECTD3Q5T447 861 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SKAP1Q86WV1 359 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 DGKHQ86XP1 1220 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 C8orf58Q8NAV2 365 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 DEPDC7Q96QD5 511 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MAGEB2O15479 319 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MAFGO15525 162 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 COBLO75128 1261 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SKAP2O75563 359 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 THRAP10827 490 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 PLEKHA7Q6IQ23 1121 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 ANKHQ9HCJ1 492 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 CRNNQ9UBG3 495 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 SCTRP47872 440 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 KCNK10P57789 538 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 CSNK2BP67870 215 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 ZNF200P98182 395 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 GFPT1Q06210 699 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 STK4Q13043 487 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.38□□□□□ -1.07
HTT-201ENST00000355072 IL17RAQ96F46 866 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 CNDP1Q96KN2 507 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SLC24A3Q9HC58 644 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 PYCARDQ9ULZ3 195 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 METTL21EPA6NDL7 271 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 PIK3CDO00329 1044 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 RARGP13631 454 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 GARTP22102 1010 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 XPAP23025 273 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 TYK2P29597 1187 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 CCNA1P78396 465 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MOSPD2Q8NHP6 518 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SLC20A1Q8WUM9 679 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 TRABDQ9H4I3 376 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 TAGLN3Q9UI15 199 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SLC24A2Q9UI40 661 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 IRAK3Q9Y616 596 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 SYNCRIPO60506 623 aaKnown RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 GZMAP12544 262 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 CDK7P50613 346 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 TBC1D10BQ4KMP7 808 aaPredicted RBP8.38□□□□□ -1.07
HTT-201ENST00000355072 ANKS1AQ92625 1134 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 Q96MT0 163 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 PCDHB4Q9Y5E5 795 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms