RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ODF2LQ9ULJ1 636 aa17.28■□□□□ 0.36
PDGFA-201ENST00000354513 YIPF1Q9Y548 306 aa17.28■□□□□ 0.36
PDGFA-201ENST00000354513 KIAA1549LQ6ZVL6 1849 aa17.28■□□□□ 0.36
PDGFA-201ENST00000354513 OAZ2O95190 189 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 SMTNP53814 917 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 PDZD4Q76G19 769 aaPredicted RBP17.27■□□□□ 0.36
PDGFA-201ENST00000354513 GPBP1Q86WP2 473 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 DCLK2Q8N568 766 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 APPL2Q8NEU8 664 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 SHKBP1Q8TBC3 707 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 NELL1Q92832 810 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 DNASE1L2Q92874 299 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 BCO2Q9BYV7 579 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 SPATA6Q9NWH7 488 aaPredicted RBP17.27■□□□□ 0.36
PDGFA-201ENST00000354513 FBXO4Q9UKT5 387 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 TBX20Q9UMR3 447 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 UBQLN1Q9UMX0 589 aaKnown RBP17.27■□□□□ 0.36
PDGFA-201ENST00000354513 KIF3AQ9Y496 699 aa17.27■□□□□ 0.36
PDGFA-201ENST00000354513 ZNF638Q14966 1978 aaKnown RBP17.27■□□□□ 0.36
PDGFA-201ENST00000354513 TISP43B9A030 160 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 ARNTLO00327 626 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 SPTLC1O15269 473 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 CPB1P15086 417 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 PLCG1P19174 1290 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 CYP3A5P20815 502 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 ID4P47928 161 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 YWHAHQ04917 246 aaPredicted RBP17.26■□□□□ 0.35
PDGFA-201ENST00000354513 MCM6Q14566 821 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 ZNF528Q3MIS6 628 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 MAP4K3Q8IVH8 894 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 TTC9BQ8N6N2 239 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 KCNG4Q8TDN1 519 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 CDK5RAP3Q96JB5 506 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 AK8Q96MA6 479 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 PGLYRP2Q96PD5 576 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 TMEM209Q96SK2 561 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 IKZF4Q9H2S9 585 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 PRMT8Q9NR22 394 aaPredicted RBP17.26■□□□□ 0.35
PDGFA-201ENST00000354513 LARSQ9P2J5 1176 aaKnown RBP17.26■□□□□ 0.35
PDGFA-201ENST00000354513 EP300Q09472 2414 aaPredicted RBP17.26■□□□□ 0.35
PDGFA-201ENST00000354513 MYO16Q9Y6X6 1858 aa17.26■□□□□ 0.35
PDGFA-201ENST00000354513 A0A0B4J269 797 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 K7ENM7 598 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 ZNF197O14709 1029 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 OGTO15294 1046 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 SLC26A4O43511 780 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 MYL4P12829 197 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 TDGF1P13385 188 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 VIPR2P41587 438 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 MATR3P43243 847 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDGFA-201ENST00000354513 RPS9P46781 194 aaKnown RBP17.25■□□□□ 0.35
PDGFA-201ENST00000354513 LIG4P49917 911 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 PPP2R3AQ06190 1150 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 KARSQ15046 597 aaKnown RBP17.25■□□□□ 0.35
PDGFA-201ENST00000354513 TEAD2Q15562 447 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 SPATA1Q5VX52 437 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 ZC3H14Q6PJT7 736 aaKnown RBP17.25■□□□□ 0.35
PDGFA-201ENST00000354513 TSSK4Q6SA08 328 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 SMARCD2Q92925 531 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 RMDN1Q96DB5 314 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 BICD1Q96G01 975 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 MKNK1Q9BUB5 465 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 TRPV4Q9HBA0 871 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 ZFP14Q9HCL3 533 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 CPSF3Q9UKF6 684 aaKnown RBP17.25■□□□□ 0.35
PDGFA-201ENST00000354513 MAFFQ9ULX9 164 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 GREB1Q4ZG55 1949 aa17.25■□□□□ 0.35
PDGFA-201ENST00000354513 EML5Q05BV3 1969 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 MTMR11A4FU01 709 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 ANKRD63C9JTQ0 380 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 H3BQV1 296 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 HNRNPDLO14979 420 aaKnown RBP17.24■□□□□ 0.35
PDGFA-201ENST00000354513 LAMTOR5O43504 91 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 LILRB5O75023 590 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 NFICP08651 508 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 NMT1P30419 496 aaKnown RBP17.24■□□□□ 0.35
PDGFA-201ENST00000354513 MAGEA9P43362 315 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
PDGFA-201ENST00000354513 WDR44Q5JSH3 913 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 STXBP5Q5T5C0 1151 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 JADE1Q6IE81 842 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 KIAA2013Q8IYS2 634 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 ZBTB44Q8NCP5 570 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 RAD54LQ92698 747 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 ZNF334Q9HCZ1 680 aaPredicted RBP17.24■□□□□ 0.35
PDGFA-201ENST00000354513 HELZP42694 1942 aaKnown RBP17.24■□□□□ 0.35
PDGFA-201ENST00000354513 ANAPC1Q9H1A4 1944 aa17.24■□□□□ 0.35
PDGFA-201ENST00000354513 H0YCG3 227 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 TYMPP19971 482 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 GDI1P31150 447 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 LILRA4P59901 499 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 GTF2BQ00403 316 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 CSTF1Q05048 431 aaKnown RBP17.23■□□□□ 0.35
PDGFA-201ENST00000354513 DUSP4Q13115 394 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 GPR17Q13304 367 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 CENPPQ6IPU0 288 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 USP49Q70CQ1 688 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 MYCT1Q8N699 235 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 OR10T2Q8NGX3 314 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms