RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 MXI1P50539 228 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 KCNH2Q12809 1159 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 TCP11X2Q5H9J9 407 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 RTP2Q5QGT7 225 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 SUSD3Q96L08 255 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 ZNF560Q96MR9 790 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 TCF25Q9BQ70 676 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 ZBP1Q9H171 429 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 XYLT2Q9H1B5 865 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 CHST7Q9NS84 486 aa23.86■■□□□ 1.41
SHMT1-203ENST00000354098 R3HCC1Q9Y3T6 440 aaKnown RBP23.86■■□□□ 1.41
SHMT1-203ENST00000354098 HLA-DRAP01903 254 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 TKTP29401 623 aaKnown RBP23.85■■□□□ 1.41
SHMT1-203ENST00000354098 PNPLA4P41247 253 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 FMO5P49326 533 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 DSTYKQ6XUX3 929 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 TMC7Q7Z402 723 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 LUZP1Q86V48 1076 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 SENP8Q96LD8 212 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 HERC2P3Q9BVR0 1158 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 TSPY26PQ9H489 355 aa23.85■■□□□ 1.41
SHMT1-203ENST00000354098 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.85■■□□□ 1.41
SHMT1-203ENST00000354098 M0QZQ0 153 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 ZNF445P59923 1031 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 ELAVL2Q12926 359 aaKnown RBP23.84■■□□□ 1.41
SHMT1-203ENST00000354098 USP41Q3LFD5 358 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 SV2CQ496J9 727 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 MICAL1Q8TDZ2 1067 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 SEMA4DQ92854 862 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 GUCD1Q96NT3 240 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 CDX2Q99626 313 aaPredicted RBP23.84■■□□□ 1.41
SHMT1-203ENST00000354098 PI4K2AQ9BTU6 479 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 ENTPD7Q9NQZ7 604 aa23.84■■□□□ 1.41
SHMT1-203ENST00000354098 TIMM13Q9Y5L4 95 aaPredicted RBP23.84■■□□□ 1.41
SHMT1-203ENST00000354098 SMTNL1A8MU46 457 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 C2CD2LO14523 706 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 FSCN2O14926 492 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 CTSAP10619 480 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 ZNF18P17022 549 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 FGFR3P22607 806 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 EEF1GP26641 437 aaKnown RBP23.83■■□□□ 1.41
SHMT1-203ENST00000354098 PIK3CAP42336 1068 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 MYO1EQ12965 1108 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 KIAA0319Q5VV43 1072 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 PLPP4Q5VZY2 271 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 MYLIPQ8WY64 445 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 MRPL38Q96DV4 380 aaKnown RBP23.83■■□□□ 1.41
SHMT1-203ENST00000354098 TUBGCP2Q9BSJ2 902 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 TTPALQ9BTX7 342 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 LMAN2LQ9H0V9 348 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 MTMR10Q9NXD2 777 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 MYO9BQ13459 2157 aa23.83■■□□□ 1.41
SHMT1-203ENST00000354098 HIDE1A8MVS5 230 aa23.83■■□□□ 1.4
SHMT1-203ENST00000354098 BECN2A8MW95 431 aa23.83■■□□□ 1.4
SHMT1-203ENST00000354098 CYB561D2O14569 222 aa23.83■■□□□ 1.4
SHMT1-203ENST00000354098 CXCL14O95715 111 aa23.83■■□□□ 1.4
SHMT1-203ENST00000354098 AFPP02771 609 aaKnown RBP23.83■■□□□ 1.4
SHMT1-203ENST00000354098 KIAA1841Q6NSI8 718 aa23.83■■□□□ 1.4
SHMT1-203ENST00000354098 FBXL13Q8NEE6 735 aa23.83■■□□□ 1.4
SHMT1-203ENST00000354098 STK39Q9UEW8 545 aa23.83■■□□□ 1.4
SHMT1-203ENST00000354098 SNX9Q9Y5X1 595 aa23.83■■□□□ 1.4
SHMT1-203ENST00000354098 CAVIN2O95810 425 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 ATP1A3P13637 1013 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 PRKCSHP14314 528 aaPredicted RBP23.82■■□□□ 1.4
SHMT1-203ENST00000354098 IGFBP4P22692 258 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 ATICP31939 592 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 CA8P35219 290 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 GLUD2P49448 558 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 DSG1Q02413 1049 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 PTPROQ16827 1216 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 WDR72Q3MJ13 1102 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 MIIPQ5JXC2 388 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 SPOPLQ6IQ16 392 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 PRSS55Q6UWB4 352 aaPredicted RBP23.82■■□□□ 1.4
SHMT1-203ENST00000354098 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.82■■□□□ 1.4
SHMT1-203ENST00000354098 RIN2Q8WYP3 895 aaPredicted RBP23.82■■□□□ 1.4
SHMT1-203ENST00000354098 RAB20Q9NX57 234 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 PCDHB8Q9UN66 801 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 COQ4Q9Y3A0 265 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 MTCH2Q9Y6C9 303 aa23.82■■□□□ 1.4
SHMT1-203ENST00000354098 LILRB3O75022 631 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 URODP06132 367 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 MYL7Q01449 175 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 KRT31Q15323 416 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 PTPN14Q15678 1187 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 MAN2A1Q16706 1144 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 SGSM1Q2NKQ1 1148 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 ZNF699Q32M78 642 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 FAM200AQ8TCP9 573 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 GDAP2Q9NXN4 497 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 TAB2Q9NYJ8 693 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 VWA8A3KMH1 1905 aa23.81■■□□□ 1.4
SHMT1-203ENST00000354098 SYN3O14994 580 aa23.8■■□□□ 1.4
SHMT1-203ENST00000354098 CLSTN1O94985 981 aa23.8■■□□□ 1.4
SHMT1-203ENST00000354098 STAU1O95793 577 aaKnown RBP23.8■■□□□ 1.4
SHMT1-203ENST00000354098 ASS1P00966 412 aaKnown RBP23.8■■□□□ 1.4
SHMT1-203ENST00000354098 CDK11BP21127 795 aaKnown RBP23.8■■□□□ 1.4
SHMT1-203ENST00000354098 PAX3P23760 479 aa23.8■■□□□ 1.4
SHMT1-203ENST00000354098 MRPL43Q8N983 215 aaKnown RBP23.8■■□□□ 1.4
SHMT1-203ENST00000354098 LNX1Q8TBB1 728 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms