RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ARHGEF6Q15052 776 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 MAPK6Q16659 721 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 IZUMO3Q5VZ72 239 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 LPIN2Q92539 896 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 CNPY3Q9BT09 278 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ABCB11O95342 1321 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 YTHDC2Q9H6S0 1430 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 C5orf60A6NFR6 353 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 EYA2O00167 538 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 AXIN1O15169 862 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 MTSS1O43312 755 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SLC26A4O43511 780 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TKTP29401 623 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 MMP13P45452 471 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 HERVK_113P62684 666 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ZNF200P98182 395 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 IL1RL1Q01638 556 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 RBM20Q5T481 1227 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 CCSAPQ6IQ19 270 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 TOM1L2Q6ZVM7 507 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ZNF570Q96NI8 536 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 BTBD9Q96Q07 612 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TEX13BQ9BXU2 312 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 GCOM2Q9BZD3 368 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 TRIM39Q9HCM9 518 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PLK2Q9NYY3 685 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 RAB26Q9ULW5 256 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SCAF8Q9UPN6 1271 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 HPS5Q9UPZ3 1129 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 WASLO00401 505 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 ZSCAN9O15535 394 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 RTN2O75298 545 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 STARD3NLO95772 234 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ABL1P00519 1130 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PLCG1P19174 1290 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 IL12AP29459 219 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 HOXD12P35452 270 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TTBK2Q6IQ55 1244 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 MICU2Q8IYU8 434 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TRIM45Q9H8W5 580 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 AGPAT5Q9NUQ2 364 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 NSMCE4AQ9NXX6 385 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 DNAJB4Q9UDY4 337 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 AURKCQ9UQB9 309 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 MYH2Q9UKX2 1941 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PHGDHO43175 533 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 NUDT17P0C025 328 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TPBGLP0DKB5 382 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PSMA4P25789 261 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 POLR2BP30876 1174 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 ACAP2Q15057 778 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 RAPH1Q70E73 1250 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ERI1Q8IV48 349 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 MYCT1Q8N699 235 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ARHGEF10LQ9HCE6 1279 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PNPLA3Q9NST1 481 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 IQSEC2Q5JU85 1478 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 URB1O60287 2271 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 KANSL1LA0AUZ9 987 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SAGE2PA6NJ88 616 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 FAM196BA6NMK8 535 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SH2B2O14492 632 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 CCNA2P20248 432 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TECP42680 631 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PTK2Q05397 1052 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TRAF2Q12933 501 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 BBS9Q3SYG4 887 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 NIPAL1Q6NVV3 410 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 RAB44Q7Z6P3 723 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 EXOC3L1Q86VI1 746 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 NEDD1Q8NHV4 660 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 CERKQ8TCT0 537 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SLC39A3Q9BRY0 314 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 JMJD4Q9H9V9 463 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TRIM49BA6NDI0 452 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 DDX3XO00571 662 aaKnown RBP eCLIP5.27□□□□□ -1.57
SKP1-202ENST00000353411 NDUFB5O43674 189 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SEMA3DO95025 777 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 LINGO3P0C6S8 592 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 FAM153BP0C7A2 387 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 NPEPPSP55786 919 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SUZ12Q15022 739 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 FAM153CQ494X1 144 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ANO7Q6IWH7 933 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 EFHD2Q96C19 240 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 DDX50Q9BQ39 737 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 MPP6Q9NZW5 540 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 USP42Q9H9J4 1324 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 FLT4P35916 1363 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 THRAP10827 490 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 CCT3P49368 545 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 TUFMP49411 452 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 AMPD2Q01433 879 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PDIA2Q13087 525 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 TAB1Q15750 504 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 EZH2Q15910 746 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 EDRF1Q3B7T1 1238 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SLC10A5Q5PT55 438 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SCARA3Q6AZY7 606 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SLFN12Q8IYM2 578 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms