RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 AXIN1O15169 862 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 MOCS2O96007 188 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 NCF2P19878 526 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 WASHC5Q12768 1159 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 HIC1Q14526 733 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 RGS21Q2M5E4 152 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 E4F1Q66K89 784 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 NSUN4Q96CB9 384 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 WDR24Q96S15 920 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 CEP72Q9P209 647 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 KLHL8Q9P2G9 620 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 PI4K2BG5E9Z4 385 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 CACNB2Q08289 660 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 CCNI2Q6ZMN8 369 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 LUZP2Q86TE4 346 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 SAYSD1Q9NPB0 183 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 ABHD10Q9NUJ1 306 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 MBD2Q9UBB5 411 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 CNOT7Q9UIV1 285 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 TTC7AQ9ULT0 858 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 KLHL20Q9Y2M5 609 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 NCK2O43639 380 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 CIITAP33076 1130 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 IL12RB1P42701 662 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 BPIFA3Q9BQP9 254 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 INTS2Q9H0H0 1204 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 UPF3AQ9H1J1 476 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 DAGLAQ9Y4D2 1042 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 QRICH2Q9H0J4 1663 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 ATF4P18848 351 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 ATP6V1E1P36543 226 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 WASHC2DQ5SRD0 308 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 ATAD3BQ5T9A4 648 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 ACAP3Q96P50 834 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 C12orf4Q9NQ89 552 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 SELENONQ9NZV5 590 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 SNX24Q9Y343 169 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 LGALS16A8MUM7 142 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 TCP11X1B4DZS4 312 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 GSNP06396 782 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 PSMC5P62195 406 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 MCL1Q07820 350 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 DNAL1Q4LDG9 190 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 PRR5LQ6MZQ0 368 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 C1orf228Q6PIY5 440 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 STOX1Q6ZVD7 989 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 PLD3Q8IV08 490 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 URGCPQ8TCY9 931 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 MRPS26Q9BYN8 205 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 L3MBTL1Q9Y468 752 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 TRPM1Q7Z4N2 1603 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 IQGAP3Q86VI3 1631 aa11.63□□□□□ -0.55
SMARCE1-202ENST00000348513 TJP3O95049 919 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 NAT1P18440 290 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 ART3Q13508 389 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 RNF219Q5W0B1 726 aaPredicted RBP11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 RMDN1Q96DB5 314 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 NUP85Q9BW27 656 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 TIMMDC1Q9NPL8 285 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 PKD2L2Q9NZM6 624 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 MFN2O95140 757 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 MFSD14CQ5VZR4 134 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 ATG16L1Q676U5 607 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 RHOT2Q8IXI1 618 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 TMEM35BQ8NCS4 154 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 CDC42BPAQ5VT25 1732 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 LRRC7Q96NW7 1537 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 TULP4Q9NRJ4 1543 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 TRIM64A6NGJ6 449 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 TRIM64BA6NI03 449 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 GNGT2O14610 69 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 NPTXRO95502 500 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 GNA15P30679 374 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 SFNP31947 248 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 LRRC36Q1X8D7 754 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 C12orf60Q5U649 245 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 LPCAT2Q7L5N7 544 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 MAF1Q9H063 256 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 PPARGC1AQ9UBK2 798 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 CFLARO15519 480 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 CLASP2O75122 1294 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 TSC22D2O75157 780 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 PYGMP11217 842 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 YWHAHQ04917 246 aaPredicted RBP11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 LAMC2Q13753 1193 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 DRAP1Q14919 205 aaPredicted RBP11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 SDE2Q6IQ49 451 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 RNF19BQ6ZMZ0 732 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 KRT73Q86Y46 540 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 EPAS1Q99814 870 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 SLC9A2Q9UBY0 812 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 LAMC1P11047 1609 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 GSTA4O15217 222 aa11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 DDX5P17844 614 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 NMT1P30419 496 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-202ENST00000348513 FMR1NBQ8N0W7 255 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms