RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 CYP4F22Q6NT55 531 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 ZNF365Q70YC5 407 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 ARHGEF19Q8IW93 802 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 C4orf33Q8N1A6 199 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 PPP2R3CQ969Q6 453 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 ZNF653Q96CK0 615 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
LRP8-202ENST00000347547 ANO3Q9BYT9 981 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 TRIM55Q9BYV6 548 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 BCAS3Q9H6U6 928 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 GPCPD1Q9NPB8 672 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 SEL1LQ9UBV2 794 aa16.57■□□□□ 0.24
LRP8-202ENST00000347547 F5H6K3 240 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 TGDSO95455 350 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 KLRC2P26717 231 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 THOC5Q13769 683 aaKnown RBP16.56■□□□□ 0.24
LRP8-202ENST00000347547 RINT1Q6NUQ1 792 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 NET1Q7Z628 596 aaPredicted RBP16.56■□□□□ 0.24
LRP8-202ENST00000347547 FAM71AQ8IYT1 594 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 SCYL3Q8IZE3 742 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 ST13P4Q8IZP2 240 aaPredicted RBP16.56■□□□□ 0.24
LRP8-202ENST00000347547 PDCD7Q8N8D1 485 aaKnown RBP16.56■□□□□ 0.24
LRP8-202ENST00000347547 VPS11Q9H270 941 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 CIDEBQ9UHD4 219 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 RABGAP1Q9Y3P9 1069 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 PIK3CDO00329 1044 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 FAM13AO94988 1023 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 SGPL1O95470 568 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 ANPEPP15144 967 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 NMT1P30419 496 aaKnown RBP16.56■□□□□ 0.24
LRP8-202ENST00000347547 SLC1A1P43005 524 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 USP4Q13107 963 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 KLF1Q13351 362 aaPredicted RBP16.56■□□□□ 0.24
LRP8-202ENST00000347547 COG2Q14746 738 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 SLC10A5Q5PT55 438 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 IZUMO2Q6UXV1 221 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 STXBP4Q6ZWJ1 553 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 ACAD11Q709F0 780 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 NME8Q8N427 588 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 FAM20AQ96MK3 541 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 UIMC1Q96RL1 719 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 DDX50Q9BQ39 737 aaKnown RBP16.56■□□□□ 0.24
LRP8-202ENST00000347547 HERPUD2Q9BSE4 406 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 EPB41L1Q9H4G0 881 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 ZDHHC7Q9NXF8 308 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 FETUBQ9UGM5 382 aa16.56■□□□□ 0.24
LRP8-202ENST00000347547 ZCCHC18P0CG32 403 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 CYP2J2P51589 502 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 CETN1Q12798 172 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 EPC2Q52LR7 807 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 PCNX4Q63HM2 1172 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 CCDC62Q6P9F0 684 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 KRT27Q7Z3Y8 459 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 MYLK4Q86YV6 388 aaPredicted RBP16.55■□□□□ 0.24
LRP8-202ENST00000347547 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.24
LRP8-202ENST00000347547 NAT14Q8WUY8 206 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 ARHGEF1Q92888 912 aaKnown RBP16.55■□□□□ 0.24
LRP8-202ENST00000347547 FIZ1Q96SL8 496 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 GALNT8Q9NY28 637 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 PSMC3IPQ9P2W1 217 aaPredicted RBP16.55■□□□□ 0.24
LRP8-202ENST00000347547 R3HDM2Q9Y2K5 976 aaKnown RBP16.55■□□□□ 0.24
LRP8-202ENST00000347547 ZNF536O15090 1300 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 TM9SF1O15321 606 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 ATP9BO43861 1147 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 IL1BP01584 269 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 ESRRAP11474 423 aaPredicted RBP16.55■□□□□ 0.24
LRP8-202ENST00000347547 PGM1P36871 562 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 FMO1Q01740 532 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 AP3B2Q13367 1082 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 TRMT5Q32P41 509 aaKnown RBP16.55■□□□□ 0.24
LRP8-202ENST00000347547 SH2D4BQ5SQS7 431 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 SLC5A5Q92911 643 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 FNBP1Q96RU3 617 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 GPAMQ9HCL2 828 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 PREBQ9HCU5 417 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 SAYSD1Q9NPB0 183 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 DCTN4Q9UJW0 460 aa16.55■□□□□ 0.24
LRP8-202ENST00000347547 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 NFASCO94856 1347 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 POC1B-GALNT4F8VUJ3 575 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 PLS3P13797 630 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 POLD1P28340 1107 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 VPS41P49754 854 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 ARFIP2P53365 341 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 DLGAP5Q15398 846 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 FAM196AQ6ZSG2 479 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 ZNF720Q7Z2F6 126 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 ADGRG6Q86SQ4 1221 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 LRRC47Q8N1G4 583 aaKnown RBP16.54■□□□□ 0.24
LRP8-202ENST00000347547 MYCT1Q8N699 235 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 LENG9Q96B70 501 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 MAK16Q9BXY0 300 aaKnown RBP16.54■□□□□ 0.24
LRP8-202ENST00000347547 PHACTR1Q9C0D0 580 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 PARVGQ9HBI0 331 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 NDUFA13Q9P0J0 144 aa16.54■□□□□ 0.24
LRP8-202ENST00000347547 SMIM31A0A1B0GVY4 71 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms