RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PCSK7Q16549 785 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 TNIP2Q8NFZ5 429 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 OPTNQ96CV9 577 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 ADNPQ9H2P0 1102 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 ERAP1Q9NZ08 941 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 TBC1D4O60343 1298 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 ATP1A1P05023 1023 aaKnown RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 CYP2C9P11712 490 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 GOLGA7BQ2TAP0 167 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 TDRD10Q5VZ19 366 aaKnown RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 CENPPQ6IPU0 288 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 C4orf22Q6V702 233 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 BTN2A2Q8WVV5 523 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 C7orf25Q9BPX7 421 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 C6orf203Q9P0P8 240 aaPredicted RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 PSMC3IPQ9P2W1 217 aaPredicted RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 NCALDP61601 193 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 HIST2H2ACQ16777 129 aaPredicted RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 SBK1Q52WX2 424 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 HIST2H2AA3Q6FI13 130 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 SHC4Q6S5L8 630 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 KCNV2Q8TDN2 545 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 C20orf96Q9NUD7 363 aaPredicted RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 EIF3DO15371 548 aaKnown RBP eCLIP24.18■■□□□ 1.46
NPAS3-201ENST00000346562 PTK6Q13882 451 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 C6orf10Q5SRN2 563 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 NOTUMQ6P988 496 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 HHIPL2Q6UWX4 724 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 FAM162AQ96A26 154 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 PAK5Q9P286 719 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 SMAPO00193 183 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 PDHA1P08559 390 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 RAB6BQ9NRW1 208 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 LIMA1Q9UHB6 759 aaKnown RBP24.18■■□□□ 1.46
NPAS3-201ENST00000346562 C16orf96A6NNT2 1141 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 NDUFB10O96000 172 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 MAGEA9P43362 315 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 PLEKHM3Q6ZWE6 761 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 NUP93Q8N1F7 819 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 SLC25A41Q8N5S1 370 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 SLC30A5Q8TAD4 765 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 PLA2G12BQ9BX93 195 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 CCSER1Q9C0I3 900 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 HBP1O60381 514 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 SPAG6O75602 509 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 APOA4P06727 396 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 GPD1P21695 349 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 PGM1P36871 562 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 TP53BP2Q13625 1128 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 ANGEL2Q5VTE6 544 aaKnown RBP24.18■■□□□ 1.46
NPAS3-201ENST00000346562 WDR48Q8TAF3 677 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 GPR63Q9BZJ6 419 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 SPRP35270 261 aaPredicted RBP24.18■■□□□ 1.46
NPAS3-201ENST00000346562 TMEM62Q0P6H9 643 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 STX3Q13277 289 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 SPATA21Q7Z572 469 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 NUDT12Q9BQG2 462 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 PITPNM2Q9BZ72 1349 aa24.18■■□□□ 1.46
NPAS3-201ENST00000346562 A0A0G2JLW4 131 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 MYO1GB0I1T2 1018 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 MAFGO15525 162 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 EXTL3O43909 919 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 FCGRTP55899 365 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 PHF20Q9BVI0 1012 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 TMEM117Q9H0C3 514 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 FBXO2Q9UK22 296 aaPredicted RBP24.17■■□□□ 1.46
NPAS3-201ENST00000346562 CCL15-CCL14A0A0B4J2E2 113 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 ZNF200P98182 395 aaPredicted RBP24.17■■□□□ 1.46
NPAS3-201ENST00000346562 CCL15Q16663 113 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 EFCAB12Q6NXP0 572 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 XRRA1Q6P2D8 792 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 SLITRK1Q96PX8 696 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 RIC8BQ9NVN3 520 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 AMACRQ9UHK6 382 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 DYNC1I2Q13409 638 aaKnown RBP24.17■■□□□ 1.46
NPAS3-201ENST00000346562 RNF180Q86T96 592 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.17■■□□□ 1.462e-6■■■■■ 52.6
NPAS3-201ENST00000346562 MBD5Q9P267 1494 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 CCDC78A2IDD5 438 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 MTSS1O43312 755 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 PSMA3P25788 255 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 MRPL28Q13084 256 aaKnown RBP24.17■■□□□ 1.46
NPAS3-201ENST00000346562 FAM117BQ6P1L5 589 aa24.17■■□□□ 1.46
NPAS3-201ENST00000346562 C17orf102A2RUQ5 167 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 ENO1P06733 434 aaKnown RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 PLA2G4AP47712 749 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 NLRP11P59045 1033 aaKnown RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 SLC18A3Q16572 532 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 TRAPPC11Q7Z392 1133 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 TRIM48Q8IWZ4 208 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 CINPQ9BW66 212 aaPredicted RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 VCPKMTQ9H867 229 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 GUCA1CO95843 209 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 POLBP06746 335 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 STAG3L1P0CL83 205 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 ODC1P11926 461 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 GYS2P54840 703 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 DNAL1Q4LDG9 190 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 C10orf120Q5SQS8 335 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 PCYOX1LQ8NBM8 494 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms